RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 GRPEL2Q8TAA5 225 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 ITLN2Q8WWU7 325 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 LPGAT1Q92604 370 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 LGALS12Q96DT0 336 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 OMA1Q96E52 524 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 PRICKLE1Q96MT3 831 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 LITAFQ99732 161 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 MED10Q9BTT4 135 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 RBM4Q9BWF3 364 aaKnown RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF717Q9BY31 904 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-218ENST00000553309 SLC2A11Q9BYW1 496 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 RHBGQ9H310 441 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 ASB7Q9H672 318 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 ZC4H2Q9NQZ6 224 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 SPASTQ9UBP0 616 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 GPR34Q9UPC5 381 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 NTNG1Q9Y2I2 539 aa4.37□□□□□ -1.71
ATXN3-218ENST00000553309 A0A0G2JNG1 304 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 EDDM13A0A1B0GTR0 161 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 NCF1BA6NI72 391 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF233A6NK53 670 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PP2D1A8MPX8 630 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 NCF1CA8MVU1 366 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 C2orf74A8MZ97 194 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF879B4DU55 563 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ANKRD63C9JTQ0 380 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 LMO7DNF2Z398 122 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 H0YJX3 145 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 KPNA4O00629 521 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PLPP2O43688 288 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 LRCH4O75427 683 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 CBR3O75828 277 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 WISP2O76076 250 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PDE9AO76083 593 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 SEMA3DO95025 777 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 SIX3O95343 332 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 KRT16P08779 473 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 OR52Z1P0C646 297 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 WARSP23381 471 aaKnown RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 HRH2P25021 359 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PON1P27169 355 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 RPA1P27694 616 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 DLSTP36957 453 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 SPAM1P38567 509 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 WNT5AP41221 380 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 SLC15A1P46059 708 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 RPL5P46777 297 aaKnown RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 STK19P49842 368 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ALDH3A2P51648 485 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ARHGDIAP52565 204 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 CTSCP53634 463 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ERVK11-1P61568 191 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 IFITM2Q01629 132 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 BAMBIQ13145 260 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 KIR2DS5Q14953 304 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF630Q2M218 657 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF829Q3KNS6 432 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 C14orf177Q52M58 125 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PTRHD1Q6GMV3 140 aaKnown RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 BLOC1S2Q6QNY1 142 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 FAM47EQ6ZV65 393 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 TSPAN33Q86UF1 283 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 HORMAD1Q86X24 394 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 CEP97Q8IW35 865 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 IQCKQ8N0W5 287 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 CRYBG2Q8N1P7 616 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 LRRC52Q8N7C0 313 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF321PQ8N8H1 164 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 CHDHQ8NE62 594 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 TAS1R2Q8TE23 839 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PPP4R1Q8TF05 950 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 HEXDCQ8WVB3 486 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 FCAMRQ8WWV6 532 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 POMGNT1Q8WZA1 660 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 HDAC2Q92769 488 aaKnown RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 SYN2Q92777 582 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PNPLA2Q96AD5 504 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 LRRC39Q96DD0 335 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ARSGQ96EG1 525 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF486Q96H40 463 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 BMFQ96LC9 184 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 AK8Q96MA6 479 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 C17orf77Q96MU5 243 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM237Q96Q45 408 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PANX2Q96RD6 677 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 FERMT1Q9BQL6 677 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 DDA1Q9BW61 102 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 HOXD1Q9GZZ0 328 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 DCLRE1BQ9H816 532 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ZBTB20Q9HC78 741 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 MCCC2Q9HCC0 563 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 CHST11Q9NPF2 352 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 AGPAT3Q9NRZ7 376 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PARVAQ9NVD7 372 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 PACSIN2Q9UNF0 486 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 ERVW-1Q9UQF0 538 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 WBP11Q9Y2W2 641 aaKnown RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 GMPPBQ9Y5P6 360 aa4.36□□□□□ -1.71
ATXN3-218ENST00000553309 NYNRINQ9P2P1 1898 aaKnown RBP4.36□□□□□ -1.71
ATXN3-218ENST00000553309 IGHV5-10-1A0A0J9YXX1 117 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms