RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 PGGHGQ32M88 737 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 LSM12Q3MHD2 195 aaKnown RBP11.4□□□□□ -0.58
PTCH1-221ENST00000550914 GALNTL6Q49A17 601 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 DCST2Q5T1A1 773 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTCH1-221ENST00000550914 ALKBH2Q6NS38 261 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 BHLHA15Q7RTS1 189 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-221ENST00000550914 DTX2Q86UW9 622 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 P2RY8Q86VZ1 359 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 C10orf107Q8IVU9 208 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 EIF1ADQ8N9N8 165 aaKnown RBP11.4□□□□□ -0.58
PTCH1-221ENST00000550914 TOR1AIP2Q8NFQ8 470 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 OR5W2Q8NH69 310 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 SFXN5Q8TD22 340 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 ADAMTS15Q8TE58 950 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 OR5P2Q8WZ92 322 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 MOAP1Q96BY2 351 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 OTUB1Q96FW1 271 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-221ENST00000550914 CHMP6Q96FZ7 201 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 PSD2Q9BQI7 771 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 GATA5Q9BWX5 397 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-221ENST00000550914 ATAD3AQ9NVI7 634 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 FAIMQ9NVQ4 179 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 FAF1Q9UNN5 650 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-221ENST00000550914 LIPT1Q9Y234 373 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 DTNAQ9Y4J8 743 aa11.4□□□□□ -0.58
PTCH1-221ENST00000550914 GOLGA8QA0A0J9YX86 632 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 GOLGA8OA6NCC3 632 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 DPRXA6NFQ7 191 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 ZNF724A8MTY0 619 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 ZNF814B7Z6K7 855 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 GOLGA8NF8WBI6 632 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 OIP5O43482 229 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 CD5LO43866 347 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 CYTIPO60759 359 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 LYPLA1O75608 230 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-221ENST00000550914 IGHV4-39P01824 125 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 LAMP1P11279 417 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 KRT4P19013 534 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 EFNA1P20827 205 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-221ENST00000550914 ENPP1P22413 925 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 ACVR1BP36896 505 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 PCLAFQ15004 111 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 TOMM34Q15785 309 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-221ENST00000550914 UGT3A2Q3SY77 523 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 TIMM23BQ5SRD1 257 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 C3orf33Q6P1S2 294 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 KBTBD8Q8NFY9 601 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 OR7A2PQ8NGA2 310 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 TWIST2Q8WVJ9 160 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 COQ8BQ96D53 544 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 MUCL1Q96DR8 90 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 RADILQ96JH8 1075 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 PPP3R2Q96LZ3 170 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 TRAF4Q9BUZ4 470 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-221ENST00000550914 NMUR2Q9GZQ4 415 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 ALG2Q9H553 416 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 CXorf36Q9H7Y0 433 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 GPATCH2Q9NW75 528 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 ING1Q9UK53 422 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-221ENST00000550914 FIS1Q9Y3D6 152 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 TRAF6Q9Y4K3 522 aa11.39□□□□□ -0.59
PTCH1-221ENST00000550914 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTCH1-221ENST00000550914 ZNF264O43296 627 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 NPHS1O60500 1241 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 DNAJA2O60884 412 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 PGM3O95394 542 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 IFNA2P01563 188 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 CD8AP01732 235 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 SHBGP04278 402 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 UBL4AP11441 157 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 COX5AP20674 150 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 CDKN1AP38936 164 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 RASGEF1BQ0VAM2 473 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 TP53BP2Q13625 1128 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 CBFBQ13951 182 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 PPA1Q15181 289 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 NRF1Q16656 503 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 XKR7Q5GH72 579 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 ARL13AQ5H913 290 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-221ENST00000550914 PODNL1Q6PEZ8 512 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 BHLHB9Q6PI77 547 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 HIPK1Q86Z02 1210 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 DDIASQ8IXT1 998 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 ZNF619Q8N2I2 560 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 MAPK1IP1LQ8NDC0 245 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 ST8SIA1Q92185 356 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 NEUROG1Q92886 237 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 HS6ST2Q96MM7 605 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 PRPF18Q99633 342 aaKnown RBP11.38□□□□□ -0.59
PTCH1-221ENST00000550914 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
PTCH1-221ENST00000550914 C12orf65Q9H3J6 166 aaKnown RBP11.38□□□□□ -0.59
PTCH1-221ENST00000550914 EML4Q9HC35 981 aaKnown RBP11.38□□□□□ -0.59
PTCH1-221ENST00000550914 MKS1Q9NXB0 559 aa11.38□□□□□ -0.59
PTCH1-221ENST00000550914 CISD1Q9NZ45 108 aaKnown RBP11.38□□□□□ -0.59
PTCH1-221ENST00000550914 NPIPA5A0A0B4J1W7 369 aa11.37□□□□□ -0.59
PTCH1-221ENST00000550914 DUXAA6NLW8 204 aa11.37□□□□□ -0.59
PTCH1-221ENST00000550914 ESPNB1AK53 854 aa11.37□□□□□ -0.59
PTCH1-221ENST00000550914 SHISA9B4DS77 424 aa11.37□□□□□ -0.59
PTCH1-221ENST00000550914 NPIPA7E9PJI5 369 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms