RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TRPM8Q7Z2W7 1104 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 CD163Q86VB7 1156 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 ARHGAP24Q8N264 748 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 MEIOBQ8N635 442 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 ZNF563Q8TA94 476 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 ZPLD1Q8TCW7 415 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 SLC26A7Q8TE54 656 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 PINK1Q9BXM7 581 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 TRIM8Q9BZR9 551 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 ALG2Q9H553 416 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 SERINC1Q9NRX5 453 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 ARL8BQ9NVJ2 186 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 DNAJB12Q9NXW2 375 aaKnown RBP16.99■□□□□ 0.31
VPS33A-205ENST00000541169 SPRR3Q9UBC9 169 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 RPH3AQ9Y2J0 694 aaPredicted RBP16.99■□□□□ 0.31
VPS33A-205ENST00000541169 SLC6A5Q9Y345 797 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 HRH3Q9Y5N1 445 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 FREM3P0C091 2139 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 NBASA2RRP1 2371 aa16.99■□□□□ 0.31
VPS33A-205ENST00000541169 SYT5O00445 386 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 ZNF708P17019 499 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 PRKCAP17252 672 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 POU3F2P20265 443 aaPredicted RBP16.98■□□□□ 0.31
VPS33A-205ENST00000541169 APOBEC1P41238 236 aaKnown RBP16.98■□□□□ 0.31
VPS33A-205ENST00000541169 LHX2P50458 406 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 SLC7A2P52569 658 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 MXRA7P84157 204 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 QPRTQ15274 297 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 PDSS1Q5T2R2 415 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 ZNF836Q6ZNA1 936 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 CHMP1BQ7LBR1 199 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 VRK2Q86Y07 508 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 MICU2Q8IYU8 434 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 FAM26EQ8N5C1 309 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 ACER3Q9NUN7 267 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 CMTM6Q9NX76 183 aa16.98■□□□□ 0.31
VPS33A-205ENST00000541169 SPIN1Q9Y657 262 aaPredicted RBP16.98■□□□□ 0.31
VPS33A-205ENST00000541169 C17orf51A8MQB3 221 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 M0QX08 132 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 CCL21O00585 134 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 GMFGO60234 142 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 MFN2O95140 757 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 NTN1O95631 604 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 GP1BBP13224 206 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 RPS3AP61247 264 aaKnown RBP16.97■□□□□ 0.31
VPS33A-205ENST00000541169 LIPEQ05469 1076 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 EPS8Q12929 822 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 SELENBP1Q13228 472 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 C3AR1Q16581 482 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 SAMD4BQ5PRF9 694 aaKnown RBP16.97■□□□□ 0.31
VPS33A-205ENST00000541169 RPTNQ6XPR3 784 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 GRINAQ7Z429 371 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 SLC25A43Q8WUT9 341 aaPredicted RBP16.97■□□□□ 0.31
VPS33A-205ENST00000541169 CNOT9Q92600 299 aaKnown RBP16.97■□□□□ 0.31
VPS33A-205ENST00000541169 WDYHV1Q96HA8 205 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 C1orf21Q9H246 121 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 CALHM2Q9HA72 323 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 PNPLA3Q9NST1 481 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 TMEM181Q9P2C4 612 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 BAG5Q9UL15 447 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 MEMO1Q9Y316 297 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 ZNF337Q9Y3M9 751 aa16.97■□□□□ 0.31
VPS33A-205ENST00000541169 LRRTM2O43300 516 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 OIP5O43482 229 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 GMNNO75496 209 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 PSMA4P25789 261 aaKnown RBP16.96■□□□□ 0.31
VPS33A-205ENST00000541169 SLC1A3P43003 542 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 CLK1P49759 484 aaKnown RBP16.96■□□□□ 0.31
VPS33A-205ENST00000541169 SESN3P58005 492 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 NDUFAF6Q330K2 333 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 EMC4Q5J8M3 183 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 ZNF585AQ6P3V2 769 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 B3GNT6Q6ZMB0 384 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 ESPNLQ6ZVH7 1005 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 ULK2Q8IYT8 1036 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 LZICQ8WZA0 190 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 RNF145Q96MT1 663 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 UCN2Q96RP3 112 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 KCTD14Q9BQ13 255 aaPredicted RBP16.96■□□□□ 0.31
VPS33A-205ENST00000541169 TIGARQ9NQ88 270 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 ADA2Q9NZK5 511 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 TINAGQ9UJW2 476 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 CAMK2AQ9UQM7 478 aa16.96■□□□□ 0.31
VPS33A-205ENST00000541169 CLDN24A6NM45 220 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 B2RBV5 119 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 H0Y3Z8 333 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 H3BML4 177 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 NME4O00746 187 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 GSTA4O15217 222 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 EPPINO95925 133 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 AGAP20933 346 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 AQP1P29972 269 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 KDELR2P33947 212 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 RYKP34925 604 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 IDH2P48735 452 aaKnown RBP16.95■□□□□ 0.3
VPS33A-205ENST00000541169 SMSP52788 366 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 CLDN18P56856 261 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 C1orf185Q5T7R7 199 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 EEF1A1P5Q5VTE0 462 aa16.95■□□□□ 0.3
VPS33A-205ENST00000541169 C1QL3Q5VWW1 255 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms