RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 SLC22A7Q9Y694 548 aa13.02□□□□□ -0.32
UBE3B-210ENST00000539599 J3QRE1 110 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 LYRM1O43325 122 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 LAMP2P13473 410 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 NDUFS1P28331 727 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 PPP3R1P63098 170 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 FHL5Q5TD97 284 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.33
UBE3B-210ENST00000539599 FBXO46Q6PJ61 603 aaPredicted RBP13.02□□□□□ -0.33
UBE3B-210ENST00000539599 PLET1Q6UQ28 207 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 VASH1Q7L8A9 365 aaPredicted RBP13.02□□□□□ -0.33
UBE3B-210ENST00000539599 ACBD7Q8N6N7 88 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 OR4M1Q8NGD0 313 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 AP3S1Q92572 193 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 HS6ST2Q96MM7 605 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 ORAI3Q9BRQ5 295 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 HDHD2Q9H0R4 259 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 TRPV4Q9HBA0 871 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 FAM60AQ9NP50 221 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 RASD1Q9Y272 281 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.33
UBE3B-210ENST00000539599 HEATR5AQ86XA9 2040 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 FAM240BA0A1B0GVZ2 78 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 TRAPPC13A5PLN9 417 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 DUXAA6NLW8 204 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 AKR7A2O43488 359 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 IGKV1D-16P01601 117 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 PEPDP12955 493 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 NAA10P41227 235 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-210ENST00000539599 TP53I3Q53FA7 332 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 PRAMEF8Q5VWM4 474 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 PRAMEF7Q5VXH5 474 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 MEPCEQ7L2J0 689 aaKnown RBP13.01□□□□□ -0.33
UBE3B-210ENST00000539599 ZNF619Q8N2I2 560 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 DNAJC5GQ8N7S2 189 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 SAMD12Q8N8I0 201 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 SDR9C7Q8NEX9 313 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 OR4D9Q8NGE8 314 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 OR5W2Q8NH69 310 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 PHOSPHO2Q8TCD6 241 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 ZMYND19Q96E35 227 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-210ENST00000539599 GPR174Q9BXC1 333 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 OR2B2Q9GZK3 357 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 TP53BP1Q12888 1972 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-210ENST00000539599 CDHR4A6H8M9 788 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 FAM171A2A8MVW0 826 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 CPNE3O75131 537 aaKnown RBP13.01□□□□□ -0.33
UBE3B-210ENST00000539599 SYPP08247 313 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 BMP7P18075 431 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 GRPRP30550 384 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 MAT1AQ00266 395 aaKnown RBP13.01□□□□□ -0.33
UBE3B-210ENST00000539599 ALG11Q2TAA5 492 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 RANBP3LQ86VV4 465 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-210ENST00000539599 CADM2Q8N3J6 435 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 OR52R1Q8NGF1 315 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 OR9A4Q8NGU2 314 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 TM4SF19Q96DZ7 209 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 SERINC2Q96SA4 455 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 TEAD3Q99594 435 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 SOSTQ9BQB4 213 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 PIGUQ9H490 435 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 MOV10Q9HCE1 1003 aaKnown RBP13.01□□□□□ -0.33
UBE3B-210ENST00000539599 MCUBQ9NWR8 336 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 BABAM2Q9NXR7 383 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 ADAM18Q9Y3Q7 739 aa13.01□□□□□ -0.33
UBE3B-210ENST00000539599 H3BSH0 61 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 STX11O75558 287 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 SMIM10L1P0DMW3 83 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 EVI2BP34910 448 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 CDK10Q15131 360 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 IZUMO1Q8IYV9 350 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 ASCC1Q8N9N2 400 aaKnown RBP13□□□□□ -0.33
UBE3B-210ENST00000539599 OR52L1Q8NGH7 329 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 OR5H6Q8NGV6 325 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 OR4K13Q8NH42 304 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 ZPLD1Q8TCW7 415 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 GCDHQ92947 438 aaPredicted RBP13□□□□□ -0.33
UBE3B-210ENST00000539599 SMIM10Q96HG1 83 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 NPAP1Q9NZP6 1156 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 C19orf53Q9UNZ5 99 aaPredicted RBP13□□□□□ -0.33
UBE3B-210ENST00000539599 TGFBR3LH3BV60 316 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 GMFGO60234 142 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 NID1P14543 1247 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 PYCR1P32322 319 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 ZNF85Q03923 595 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 EFR3AQ14156 821 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 NFATC4Q14934 902 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 PRICKLE4Q2TBC4 344 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 OTPQ5XKR4 325 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 LYPD8Q6UX82 237 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 USP53Q70EK8 1073 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 CEACAM19Q7Z692 300 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 NOXA1Q86UR1 476 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 RSC1A1Q92681 617 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 WDR92Q96MX6 357 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 TMEM43Q9BTV4 400 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 RMI1Q9H9A7 625 aa13□□□□□ -0.33
UBE3B-210ENST00000539599 CACYBPQ9HB71 228 aaKnown RBP13□□□□□ -0.33
UBE3B-210ENST00000539599 ENAMQ9NRM1 1142 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms