RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TOMM34Q15785 309 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF141Q15928 474 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 TSTQ16762 297 aaKnown RBP12.97□□□□□ -0.33
ACTN1-205ENST00000538545 ANKDD1AQ495B1 522 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 CHCHD6Q9BRQ6 235 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 G6PC3Q9BUM1 346 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 PRODH2Q9UF12 536 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 MMACHCQ9Y4U1 282 aa12.97□□□□□ -0.33
ACTN1-205ENST00000538545 NUP210LQ5VU65 1888 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 UNC119BA6NIH7 251 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 ZNF701M0R085 212 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-205ENST00000538545 GABARAPO95166 117 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 HBQ1P09105 142 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 TBXA2RP21731 343 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 ETV5P41161 510 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 ETV1P50549 477 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 IRF3Q14653 427 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 MARCH3Q86UD3 253 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 LHFPL3Q86UP9 236 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 CPOQ8IVL8 374 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 DTWD2Q8NBA8 298 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 OR4D9Q8NGE8 314 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 OR52I1Q8NGK6 324 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 TBC1D15Q8TC07 691 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 TMEM163Q8TC26 289 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 LCORQ96JN0 433 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-205ENST00000538545 CENPOQ9BU64 300 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-205ENST00000538545 RARRES3Q9UL19 164 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 MED31Q9Y3C7 131 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 EML6Q6ZMW3 1958 aa12.96□□□□□ -0.33
ACTN1-205ENST00000538545 PMS2P1A4D2B8 440 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 SURF4O15260 269 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 MPZL2O60487 215 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 CSO75390 466 aaKnown RBP12.96□□□□□ -0.34
ACTN1-205ENST00000538545 MST1P26927 711 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 CSNK2BP67870 215 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 PGGHGQ32M88 737 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 LINC00471Q8N535 108 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 FAM26EQ8N5C1 309 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 ZFP41Q8N8Y5 198 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 MGLLQ99685 303 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 ANKRD19PQ9H560 264 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 GPN2Q9H9Y4 310 aaPredicted RBP12.96□□□□□ -0.34
ACTN1-205ENST00000538545 RXFP3Q9NSD7 469 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 WDR70Q9NW82 654 aa12.96□□□□□ -0.34
ACTN1-205ENST00000538545 SH3D21A4FU49 640 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 EFCAB10A6NFE3 127 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 J3QRK9 145 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 POLR1CO15160 346 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-205ENST00000538545 CHP2O43745 196 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 SERPINI2O75830 405 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 NOS3P29474 1203 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 PPICP45877 212 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 EMP3P54852 163 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 KLHL26Q53HC5 615 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 TMEM201Q5SNT2 666 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 ZFAND2BQ8WV99 257 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 LGALS12Q96DT0 336 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 RNFT2Q96EX2 444 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 GFM1Q96RP9 751 aaKnown RBP12.95□□□□□ -0.34
ACTN1-205ENST00000538545 TBX5Q99593 518 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF559Q9BR84 538 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 IER2Q9BTL4 223 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 CDH10Q9Y6N8 788 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 R4GN57 208 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 PMF1-BGLAPU3KQ54 211 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 BLACEA4D250 179 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 TRIM64BA6NI03 449 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 SCO2O43819 266 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 PPP1R3DO95685 299 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 GAS1P54826 345 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 SSX1Q16384 188 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 BTLAQ7Z6A9 289 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 KMT5CQ86Y97 462 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 PLEKHA8Q96JA3 519 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 SLC46A1Q96NT5 459 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 IFT27Q9BW83 186 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 TTTY10Q9BZA0 68 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 SIGLEC7Q9Y286 467 aa12.95□□□□□ -0.34
ACTN1-205ENST00000538545 YARS2Q9Y2Z4 477 aaKnown RBP12.95□□□□□ -0.34
ACTN1-205ENST00000538545 EFCAB9A8MZ26 197 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 AIREO43918 545 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 STAT5AP42229 794 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 SLC16A1P53985 500 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 BMP8AQ7Z5Y6 402 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OAFQ86UD1 273 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 SNX29P2Q8IUI4 249 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OR2T33Q8NG76 320 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OR51L1Q8NGJ5 315 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 TRUB1Q8WWH5 349 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 TMEM203Q969S6 136 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 TMEM80Q96HE8 168 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 HS6ST2Q96MM7 605 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 TAPBPLQ9BX59 468 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 WWTR1Q9GZV5 400 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 MKKSQ9NPJ1 570 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 POLE3Q9NRF9 147 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms