RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 RRM2BQ7LG56 351 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 KIF18BQ86Y91 864 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PDSS2Q86YH6 399 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PLCZ1Q86YW0 608 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 VANGL1Q8TAA9 524 aaPredicted RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 DNAJA4Q8WW22 397 aaPredicted RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 GATAD2BQ8WXI9 593 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TSLPQ969D9 159 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 CTHRC1Q96CG8 243 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 MRGPRX4Q96LA9 322 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 DACH2Q96NX9 599 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF559Q9BR84 538 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 THUMPD3Q9BV44 507 aaKnown RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 MECRQ9BV79 373 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 EBPLQ9BY08 206 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ANGPTL4Q9BY76 406 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PRRG3Q9BZD7 231 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 LAT2Q9GZY6 243 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TMEM38AQ9H6F2 299 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 WDR55Q9H6Y2 383 aaPredicted RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PLGRKTQ9HBL7 147 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 BCL2L10Q9HD36 194 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SLC22A11Q9NSA0 550 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PNPOQ9NVS9 261 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SEC14L3Q9UDX4 400 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SAMD4AQ9UPU9 718 aaKnown RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SDK1Q7Z5N4 2213 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ALG1L2C9J202 215 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 HSBP1L1C9JCN9 74 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 AQP7O14520 342 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SLC28A2O43868 658 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 CDC40O60508 579 aaKnown RBP eCLIP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 OR6B1O95007 311 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 VAMP5O95183 116 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TIAF1O95411 115 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TP53P04637 393 aaPredicted RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 JUNP05412 331 aaKnown RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 CLEC2LP0C7M8 214 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 CLUP10909 449 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 FCGR1AP12314 374 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SPINK2P20155 84 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 MAOAP21397 527 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 GABRA3P34903 492 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PIGAP37287 484 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 APOBEC1P41238 236 aaKnown RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 STARP49675 285 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TNFSF10P50591 281 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SLC37A1P57057 533 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 NUP107P57740 925 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 CAPRIN1Q14444 709 aaKnown RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 KIAA0040Q15053 153 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 OCLNQ16625 522 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SYT16Q17RD7 645 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ARHGAP11BQ3KRB8 267 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 FLYWCH1Q4VC44 716 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 LRIF1Q5T3J3 769 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SAXO2Q658L1 398 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 FAM199XQ6PEV8 388 aaPredicted RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 P4HA3Q7Z4N8 544 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 DPPA2Q7Z7J5 298 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ADCK1Q86TW2 530 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF227Q86WZ6 799 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PHC2Q8IXK0 858 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 CLEC4FQ8N1N0 589 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 CENPSQ8N2Z9 138 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ICA1LQ8NDH6 482 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF721Q8TF20 911 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ST8SIA2Q92186 375 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ARSGQ96EG1 525 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SCMH1Q96GD3 660 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 NSL1Q96IY1 281 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF681Q96N22 645 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SORT1Q99523 831 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 C12orf57Q99622 126 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 UGT2B28Q9BY64 529 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PRRG4Q9BZD6 226 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ADAM19Q9H013 955 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SPNS1Q9H2V7 528 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PIGMQ9H3S5 423 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 GLIPR2Q9H4G4 154 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF552Q9H707 407 aaPredicted RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TPT1P8Q9HAU6 139 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 RNPEPL1Q9HAU8 725 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 A4GALTQ9NPC4 353 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 B3GAT2Q9NPZ5 323 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 DDX28Q9NUL7 540 aaKnown RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 PARPBPQ9NWS1 579 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 TEX10Q9NXF1 929 aaPredicted RBP3.29□□□□□ -1.88
PTPN22-211ENST00000538253 SH2B3Q9UQQ2 575 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 DTNAQ9Y4J8 743 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 UTRNP46939 3433 aa3.29□□□□□ -1.88
PTPN22-211ENST00000538253 IGLV3-32A0A0A0MS00 114 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 A0A1B0GVC2 190 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 LRRC14BA6NHZ5 514 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 F8W036 122 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 CLIC1O00299 241 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 SCAF4O95104 1147 aaKnown RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 C6orf47O95873 294 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 WDPCPO95876 746 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 UMPSP11172 480 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms