RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 MRPL3P09001 348 aaKnown RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 AKT2P31751 481 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 DDOSTP39656 456 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 BDH1Q02338 343 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 MGAT2Q10469 447 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 GARNL3Q5VVW2 1013 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 METAP1DQ6UB28 335 aaPredicted RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 TMPRSS11FQ6ZWK6 438 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 ZNF761Q86XN6 746 aaPredicted RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 OR51A7Q8NH64 312 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 SENP5Q96HI0 755 aaPredicted RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 MED30Q96HR3 178 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 FRMD6Q96NE9 622 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 CCDC3Q9BQI4 270 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 OR2B2Q9GZK3 357 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 RNF121Q9H920 327 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 CMC2Q9NRP2 79 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 USP36Q9P275 1121 aaKnown RBP12.18□□□□□ -0.46
LDLR-203ENST00000535915 SIGLEC7Q9Y286 467 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 TMEM5Q9Y2B1 443 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 ENTPD2Q9Y5L3 495 aa12.18□□□□□ -0.46
LDLR-203ENST00000535915 A0A0J9YY10 115 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 CRYZL1O95825 349 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 CFL1P23528 166 aaKnown RBP12.17□□□□□ -0.46
LDLR-203ENST00000535915 LBX1P52954 281 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 YPEL5P62699 121 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 QPRTQ15274 297 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 RNF44Q7L0R7 432 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 UBASH3BQ8TF42 649 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 PTP4A1Q93096 173 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 KISS1RQ969F8 398 aaPredicted RBP12.17□□□□□ -0.46
LDLR-203ENST00000535915 MRPL38Q96DV4 380 aaKnown RBP12.17□□□□□ -0.46
LDLR-203ENST00000535915 SOSTQ9BQB4 213 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 TCEAL2Q9H3H9 227 aaPredicted RBP12.17□□□□□ -0.46
LDLR-203ENST00000535915 MEPEQ9NQ76 525 aaPredicted RBP12.17□□□□□ -0.46
LDLR-203ENST00000535915 TRIM36Q9NQ86 728 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 SLC22A31A6NKX4 558 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 FAM25AB3EWG3 89 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 FAM25CB3EWG5 89 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 FAM25GB3EWG6 89 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 TNFP01375 233 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 GALP22466 123 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 PPP1CAP62136 330 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 MRPS15P82914 257 aaKnown RBP12.17□□□□□ -0.46
LDLR-203ENST00000535915 GALEQ14376 348 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 ZNF542PQ5EBM4 170 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 IDNKQ5T6J7 187 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 FAAH2Q6GMR7 532 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 BPHLQ86WA6 291 aaPredicted RBP12.17□□□□□ -0.46
LDLR-203ENST00000535915 OR13H1Q8NG92 308 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 OR52R1Q8NGF1 315 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 OR5W2Q8NH69 310 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 OR4C6Q8NH72 309 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 RPLP0P6Q8NHW5 317 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 CNOT9Q92600 299 aaKnown RBP12.17□□□□□ -0.46
LDLR-203ENST00000535915 PTCHD1Q96NR3 888 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 TEAD3Q99594 435 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 TIMP4Q99727 224 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 ZNF559Q9BR84 538 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 B3GAT2Q9NPZ5 323 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 POT1Q9NUX5 634 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 C14orf105Q9NVL8 296 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 ADAM30Q9UKF2 790 aa12.17□□□□□ -0.46
LDLR-203ENST00000535915 RIIAD1A6NNX1 92 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 CENPXA8MT69 81 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 HRO43593 1189 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 OR10H2O60403 315 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 RDH16O75452 317 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 RFPL3O75679 317 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 PRKCAP17252 672 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 MAP3K8P41279 467 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 MAP2K3P46734 347 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 INPP1P49441 399 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 PLAURQ03405 335 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 DLX2Q07687 328 aaPredicted RBP12.16□□□□□ -0.46
LDLR-203ENST00000535915 MANEAQ5SRI9 462 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 ZNF613Q6PF04 617 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 ARL9Q6T311 187 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 PLET1Q6UQ28 207 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 DGAT2L6Q6ZPD8 337 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 ABI3BPQ7Z7G0 1075 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 ASCC1Q8N9N2 400 aaKnown RBP12.16□□□□□ -0.46
LDLR-203ENST00000535915 ANKRD9Q96BM1 317 aaPredicted RBP12.16□□□□□ -0.46
LDLR-203ENST00000535915 CTHRC1Q96CG8 243 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 NUFIP1Q9UHK0 495 aaKnown RBP12.16□□□□□ -0.46
LDLR-203ENST00000535915 PIAS3Q9Y6X2 628 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.16□□□□□ -0.46
LDLR-203ENST00000535915 TCRBV21S2A2A0A5A6 115 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 HCRTR1O43613 425 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 PPP1R3DO95685 299 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 CLUP10909 449 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 PSKH1P11801 424 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 DRD5P21918 477 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 NOS3P29474 1203 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 DEFB110Q30KQ9 67 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 MZT2BQ6NZ67 158 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 ZNF438Q7Z4V0 828 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 FRMD1Q8N878 549 aa12.16□□□□□ -0.46
LDLR-203ENST00000535915 CYB561A3Q8NBI2 242 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms