RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CHRNA6Q15825 494 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 OLFML2AQ68BL7 652 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ADNP2Q6IQ32 1131 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 CNIH2Q6PI25 160 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 SMARCD3Q6STE5 483 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 CACUL1Q86Y37 369 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 RAB42Q8N4Z0 105 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 HORMAD2Q8N7B1 307 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 OR8J1Q8NGP2 316 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 OR8K5Q8NH50 307 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 OR1S1Q8NH92 325 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 HOXB13Q92826 284 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 OR2M2Q96R28 347 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 TM9SF2Q99805 663 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ARHGDIGQ99819 225 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 C1orf198Q9H425 327 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 MVB12BQ9H7P6 319 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 MAT2BQ9NZL9 334 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ORC6Q9Y5N6 252 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 SESN1Q9Y6P5 492 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ATG2BQ96BY7 2078 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 OR6C70A6NIJ9 312 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 H0Y8X5 98 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ADAM11O75078 769 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 CPNE3O75131 537 aaKnown RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 PTP4A3O75365 173 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 DKK1O94907 266 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 LDOC1O95751 146 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 FHP07954 510 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 PSKH1P11801 424 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 LMO1P25800 156 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 FASLGP48023 281 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 MAP2K6P52564 334 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 PLAURQ03405 335 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 TRA2AQ13595 282 aaKnown RBP eCLIP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ST3GAL2Q16842 350 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 IFI44LQ53G44 452 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 FRG2Q64ET8 278 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 HSD17B13Q7Z5P4 300 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 OR4F15Q8NGB8 312 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 OR6P1Q8NGX9 317 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 THAP4Q8WY91 577 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 LINC00052Q96N35 136 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 FRG2BQ96QU4 278 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 PLA2G12AQ9BZM1 189 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 RAB33BQ9H082 229 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 BCL2L10Q9HD36 194 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 PARD6AQ9NPB6 346 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 DLL3Q9NYJ7 618 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF282Q9UDV7 671 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 MGAT4AQ9UM21 535 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 MGAT4BQ9UQ53 548 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 NCF1BA6NI72 391 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 NCF1CA8MVU1 366 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 FAAHO00519 579 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 TXNL1O43396 289 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 DOK2O60496 412 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 NDUFS3O75489 264 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 RAB36O95755 333 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 CSNK1EP49674 416 aaKnown RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 SWI5Q1ZZU3 235 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF630Q2M218 657 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 FAM214AQ32MH5 1076 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ACSM5Q6NUN0 579 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 C11orf88Q6PI97 169 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 SLC36A1Q7Z2H8 476 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ANKRD46Q86W74 232 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 NKAIN4Q8IVV8 208 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 SLC22A18ASQ8N1D0 253 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 RNF175Q8N4F7 328 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 MS4A15Q8N5U1 240 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 ABHD1Q96SE0 405 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 CD180Q99467 661 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 CNPPD1Q9BV87 410 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 CCDC90BQ9GZT6 254 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 TMEM74BQ9NUR3 256 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 FAM86C1Q9NVL1 165 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 TAAR2Q9P1P5 351 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 FBXW2Q9UKT8 454 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 C19orf53Q9UNZ5 99 aaPredicted RBP6.86□□□□□ -1.31
CLIP1-205ENST00000514271 SH2B3Q9UQQ2 575 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 RHBDD3Q9Y3P4 386 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 COLEC10Q9Y6Z7 277 aa6.86□□□□□ -1.31
CLIP1-205ENST00000514271 POM121BA6NF01 834 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 TFECO14948 347 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 TOX3O15405 576 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PLPP2O43688 288 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 NUDT21O43809 227 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 STK16O75716 305 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SCO1O75880 301 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 OR7A10O76100 309 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 ZIC2O95409 532 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 C8GP07360 202 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 ACSM4P0C7M7 580 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 CCNYL3P0C7X3 344 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 MAGP20916 626 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 TBXA2RP21731 343 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PAX6P26367 422 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SOX11P35716 441 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms