RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 C16orf62Q7Z3J2 963 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 CMIPQ8IY22 773 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 C10orf111Q8N326 155 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 DPP10Q8N608 796 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 MEIOBQ8N635 442 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 FBXO27Q8NI29 283 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 SLC38A5Q8WUX1 472 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 RNASE6Q93091 150 aaKnown RBP8.72□□□□□ -1.01
RNF4-221ENST00000513643 STARD4Q96DR4 205 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 SPDL1Q96EA4 605 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 AURKBQ96GD4 344 aaPredicted RBP8.72□□□□□ -1.01
RNF4-221ENST00000513643 ZNF845Q96IR2 970 aaPredicted RBP8.72□□□□□ -1.01
RNF4-221ENST00000513643 RNF145Q96MT1 663 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 BCL2L10Q9HD36 194 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 MED4Q9NPJ6 270 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 FOXD3Q9UJU5 478 aaPredicted RBP8.72□□□□□ -1.01
RNF4-221ENST00000513643 SLC35A3Q9Y2D2 325 aa8.72□□□□□ -1.01
RNF4-221ENST00000513643 MPDZO75970 2070 aa8.71□□□□□ -1.01
RNF4-221ENST00000513643 SLC22A20A6NK97 555 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 CLDN24A6NM45 220 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 A8MXE2 369 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 H3BML4 177 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 GTPBP1O00178 669 aaKnown RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 CLIC1O00299 241 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 AQP8O94778 261 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 CSTAP01040 98 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 ETFAP13804 333 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 GPX2P18283 190 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 BMP5P22003 454 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 SLC6A8P48029 635 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 ASCL1P50553 236 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 RNF144AP50876 292 aaPredicted RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 ANXA11P50995 505 aaKnown RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 ZNF41P51814 821 aaPredicted RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 STX1BP61266 288 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 FOXF1Q12946 379 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 FADDQ13158 208 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 QPRTQ15274 297 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 PRAMEF8Q5VWM4 474 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 PRAMEF7Q5VXH5 474 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 OR2A2Q6IF42 318 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 MEX3BQ6ZN04 569 aaKnown RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 GRAMD2AQ8IUY3 354 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 LILRA2Q8N149 483 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 OR10D3Q8NH80 312 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 FNDC9Q8TBE3 224 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 ST8SIA1Q92185 356 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 INTS12Q96CB8 462 aaKnown RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 ZNF317Q96PQ6 595 aaPredicted RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 THUMPD3Q9BV44 507 aaKnown RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 CCDC106Q9BWC9 280 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 PINK1Q9BXM7 581 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 QRSL1Q9H0R6 528 aaKnown RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 ACBD3Q9H3P7 528 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 PIGMQ9H3S5 423 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 RABEP2Q9H5N1 569 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 IKZF5Q9H5V7 419 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 COQ10BQ9H8M1 238 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 A4GALTQ9NPC4 353 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 ACER3Q9NUN7 267 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 THUMPD1Q9NXG2 353 aaKnown RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 PAQR5Q9NXK6 330 aaPredicted RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 CCDC167Q9P0B6 97 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 VAPAQ9P0L0 249 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 KCNN3Q9UGI6 736 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 AKAP6Q13023 2319 aa8.71□□□□□ -1.02
RNF4-221ENST00000513643 MAP1AP78559 2803 aaPredicted RBP8.71□□□□□ -1.02
RNF4-221ENST00000513643 CDHR4A6H8M9 788 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 GMFGO60234 142 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 NUDT7P0C024 238 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 CD8BP10966 210 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 SSTR2P30874 369 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 PEX19P40855 299 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 AGFG1P52594 562 aaKnown RBP8.7□□□□□ -1.02
RNF4-221ENST00000513643 SESN3P58005 492 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 DSTNP60981 165 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 RPS3AP61247 264 aaKnown RBP8.7□□□□□ -1.02
RNF4-221ENST00000513643 SORDQ00796 357 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 CBFBQ13951 182 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 PON3Q15166 354 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 ADRM1Q16186 407 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 GPAT3Q53EU6 434 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 AGKQ53H12 422 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 RUNDC3AQ59EK9 446 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 DNAJC14Q6Y2X3 702 aaPredicted RBP8.7□□□□□ -1.02
RNF4-221ENST00000513643 RETREG3Q86VR2 466 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 UBQLNLQ8IYU4 475 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 ARFGAP2Q8N6H7 521 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 OR2V1Q8NHB1 315 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 PNPT1Q8TCS8 783 aaKnown RBP8.7□□□□□ -1.02
RNF4-221ENST00000513643 CNOT9Q92600 299 aaKnown RBP8.7□□□□□ -1.02
RNF4-221ENST00000513643 OSTF1Q92882 214 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 KLHL15Q96M94 604 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 ADAM19Q9H013 955 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 SLC24A3Q9HC58 644 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 NPHS2Q9NP85 383 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 PLSCR4Q9NRQ2 329 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 STOML1Q9UBI4 398 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms