RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MFSD1Q9H3U5 465 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 PDE10AQ9Y233 779 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 BOD1L1Q8NFC6 3051 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 PTPRQQ9UMZ3 2332 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 C2CD3Q4AC94 2353 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 POLQO75417 2590 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 KIAA1671Q9BY89 1806 aa3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 MYO5AQ9Y4I1 1855 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-206ENST00000508524 SMIM30A4D0T7 59 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 C11orf98E9PRG8 122 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 LATO43561 262 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 ECDO95905 644 aaPredicted RBP3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 CCDC166P0CW27 439 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 GHRP10912 638 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 METAP1P53582 386 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 IL17AQ16552 155 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 AARDQ4LEZ3 155 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 NKAIN2Q5VXU1 208 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 C11orf88Q6PI97 169 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 TFAP2EQ6VUC0 442 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 MOB1BQ7L9L4 216 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 OR4F17Q8NGA8 305 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 TOP1MTQ969P6 601 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 DYNLL2Q96FJ2 89 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 OR4F4Q96R69 305 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 MTG1Q9BT17 334 aaPredicted RBP3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 TM2D1Q9BX74 207 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 VCPKMTQ9H867 229 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 AKIRIN1Q9H9L7 192 aaPredicted RBP3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 STARD5Q9NSY2 213 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 ERVK-18Q9QC07 812 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 MAD2L2Q9UI95 211 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 DNHD1Q96M86 4753 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 PLXNA4Q9HCM2 1894 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 TICRRQ7Z2Z1 1910 aa3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 USP9YO00507 2555 aaPredicted RBP3.32□□□□□ -1.88
TOPBP1-206ENST00000508524 MYH1P12882 1939 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 ADGRA3Q8IWK6 1321 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 C5orf51A6NDU8 294 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 MPHOSPH10O00566 681 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 CHEK1O14757 476 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 RTN2O75298 545 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 H2AFZP0C0S5 128 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 OR3A4PP47883 348 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 UCP2P55851 309 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 NPRL3Q12980 569 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 PRR4Q16378 134 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 KYAT1Q16773 422 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 CCDC14Q49A88 953 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 LGSNQ5TDP6 509 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 Q6P435 159 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 B3GLCTQ6Y288 498 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 ENTHD1Q8IYW4 607 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 CADM2Q8N3J6 435 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 OR52J3Q8NH60 311 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 GDAP1Q8TB36 358 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 APOOQ9BUR5 198 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 ZCCHC3Q9NUD5 404 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 ZFP37Q9Y6Q3 630 aaPredicted RBP3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 NBPF19A0A087WUL8 3843 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 GTF3C1Q12789 2109 aa3.31□□□□□ -1.88
TOPBP1-206ENST00000508524 NAV1Q8NEY1 1877 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 CREBBPQ92793 2442 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 HIDE1A8MVS5 230 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 EEF2KO00418 725 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 ARPC1BO15143 372 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 KINO60870 393 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 N4BP1O75113 896 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 NOL4O94818 638 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 UGT1A6P19224 532 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 RPA1P27694 616 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 SNAP25P60880 206 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 ROR1Q01973 937 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 CLPPQ16740 277 aaPredicted RBP3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 SPATA46Q5T0L3 261 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 ARMC3Q5W041 872 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 UFSP1Q6NVU6 142 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 TIFABQ6ZNK6 161 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 TSEN54Q7Z6J9 526 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 ERI1Q8IV48 349 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 C9orf40Q8IXQ3 194 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 RNF175Q8N4F7 328 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 Q8N9L7 120 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 ZBTB44Q8NCP5 570 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 DNAJA3Q96EY1 480 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 EHD1Q9H4M9 534 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 EXOSC3Q9NQT5 275 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 TRPC4Q9UBN4 977 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 PURGQ9UJV8 347 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 Q9Y3F1 56 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 MTORP42345 2549 aa3.3□□□□□ -1.88
TOPBP1-206ENST00000508524 CELSR1Q9NYQ6 3014 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 DENND4AQ7Z401 1863 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 FANCIQ9NVI1 1328 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 PATJQ8NI35 1801 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 RSPH10B2B2RC85 870 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 AKAP3O75969 853 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 CIAO1O76071 339 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 RSPH10BP0C881 870 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 ZNF286BP0CG31 522 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms