RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CACNA1GO43497 2377 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 PTPRZ1P23471 2315 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 RBM34P42696 430 aaKnown RBP7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF550Q7Z398 422 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 FBXO30Q8TB52 745 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZPLD1Q8TCW7 415 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 C3orf49Q96BT1 292 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 WDYHV1Q96HA8 205 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 MAGED4Q96JG8 741 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC19A3Q9BZV2 496 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 CLCF1Q9UBD9 225 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 CHD8Q9HCK8 2581 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 A6NL46 340 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 CLDN24A6NM45 220 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 A8MUI8 341 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 H3BNX3 289 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 REM1O75628 298 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 NR2F1P10589 423 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 OPRM1P35372 400 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 EIF1P41567 113 aaKnown RBP7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 HTR3AP46098 478 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 DNASE1L1P49184 302 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 CASP9P55211 416 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 SF3A3Q12874 501 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 GALNTL5Q7Z4T8 443 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC22A16Q86VW1 577 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 OFCC1Q8IZS5 231 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 OR1J4Q8NGS1 313 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 SNRNP40Q96DI7 357 aaKnown RBP7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 PACSIN3Q9UKS6 424 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 OR10H1Q9Y4A9 318 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 DOCK7Q96N67 2140 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 OR5F1O95221 314 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 STSP08842 583 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC1A3P43003 542 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 RASSF2P50749 326 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 ADGRG3Q86Y34 549 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 PYURFQ96I23 114 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 ECSITQ9BQ95 431 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 THUMPD3Q9BV44 507 aaKnown RBP7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 NDUFAF4Q9P032 175 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 AHCTF1Q8WYP5 2266 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 MPDZO75970 2070 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 A0A087WUJ7 227 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 NPIPA5A0A0B4J1W7 369 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 NPIPA7E9PJI5 369 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 HS6ST1O60243 411 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 SERPINB7O75635 380 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 NPIPA8P0DM63 369 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 PRG2P13727 222 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 APOBEC1P41238 236 aaKnown RBP7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 DCST1Q5T197 706 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 ANGPTL8Q6UXH0 198 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 WDR88Q6ZMY6 472 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 FKBP9P1Q75LS8 142 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 GABARAPL1Q9H0R8 117 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 COQ10BQ9H8M1 238 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 CCM2LQ9NUG4 571 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 JKAMPQ9P055 326 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 ING1Q9UK53 422 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 SAMD4AQ9UPU9 718 aaKnown RBP7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 PMS2P2O95744 297 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 CELA3AP09093 270 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 ACTR3P61158 418 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 RPS4XP62701 263 aaKnown RBP7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 KCNC4Q03721 635 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 TOMM34Q15785 309 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 CYP51A1Q16850 503 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 GPAT3Q53EU6 434 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF311Q5JNZ3 666 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 ABLIM2Q6H8Q1 611 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 GLYATQ6IB77 296 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 RTL6Q6ICC9 239 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 WBP2NLQ6ICG8 309 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 C5orf46Q6UWT4 87 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 ARSKQ6UWY0 536 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 GRINAQ7Z429 371 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 GALNT11Q8NCW6 608 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 OR6T1Q8NGN1 323 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 PRRC1Q96M27 445 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 POTEKPQ9BYX7 375 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 A0A1W2PRQ8 180 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 NPIPB13A6NJU9 1138 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 B8ZZF3 427 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 NPIPB4C9JG80 1138 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 DGCR6Q14129 220 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 LARS2Q15031 903 aaKnown RBP7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 SEM1Q6ZVN7 128 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 KRT73Q86Y46 540 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 GEMIN6Q8WXD5 167 aaKnown RBP7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 GP6Q9HCN6 339 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 RPS6KA6Q9UK32 745 aa7.48□□□□□ -1.21
CDC42SE2-208ENST00000505065 IGKV3D-15A0A087WSY6 115 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 M0QX08 132 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 NDUFB5O43674 189 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 CHP2O43745 196 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 GPIP06744 558 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 ATP6V1C1P21283 382 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 MAGEA5P43359 124 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms