RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 KCNK2O95069 426 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 ADAP00813 363 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 IGKV1D-16P01601 117 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 OPN1LWP04000 364 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 KRT16P08779 473 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 CSF3P09919 207 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 NEFHP12036 1026 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 SLC25A16P16260 332 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 PRKAG1P54619 331 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 MANFP55145 182 aaKnown RBP8.09□□□□□ -1.11
CPSF4-211ENST00000471455 ETF1P62495 437 aaKnown RBP8.09□□□□□ -1.11
CPSF4-211ENST00000471455 FOXF1Q12946 379 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 SELENBP1Q13228 472 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 STK11Q15831 433 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 CFAP157Q5JU67 520 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 C6orf52Q5T4I8 152 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 KLHL17Q6TDP4 642 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 TMEM108Q6UXF1 575 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 DNM1P46Q6ZS02 220 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 Q6ZT83 130 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 ZNF551Q7Z340 670 aaPredicted RBP8.09□□□□□ -1.11
CPSF4-211ENST00000471455 TUSC5Q8IXB3 177 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 ZNF619Q8N2I2 560 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 CCNYL1Q8N7R7 359 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 NUP43Q8NFH3 380 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 OR4C3Q8NH37 302 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 LILRB1Q8NHL6 650 aaPredicted RBP8.09□□□□□ -1.11
CPSF4-211ENST00000471455 ACMSDQ8TDX5 336 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 ZFP90Q8TF47 636 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 CHMP6Q96FZ7 201 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 MRGPRX4Q96LA9 322 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 CITED4Q96RK1 184 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 KCNA7Q96RP8 456 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 CCT7Q99832 543 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 BEX2Q9BXY8 128 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 ACSS1Q9NUB1 689 aaPredicted RBP8.09□□□□□ -1.11
CPSF4-211ENST00000471455 TMEM160Q9NX00 188 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 PYCARDQ9ULZ3 195 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 MGAT4BQ9UQ53 548 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 ACTL7BQ9Y614 415 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 PRR14LQ5THK1 2151 aa8.09□□□□□ -1.11
CPSF4-211ENST00000471455 FBN1P35555 2871 aaKnown RBP8.08□□□□□ -1.12
CPSF4-211ENST00000471455 PLCE1Q9P212 2302 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 SLC28A1O00337 649 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 ZNF195O14628 629 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 RGS14O43566 566 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 SSX4O60224 188 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 TBX19O60806 448 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 SEC22BO75396 215 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 CHEK2O96017 543 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 ABHD2P08910 425 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 LINGO3P0C6S8 592 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 MYL2P10916 166 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 GGT1P19440 569 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 PRPH2P23942 346 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 THBS2P35442 1172 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 RPL3P39023 403 aaKnown RBP8.08□□□□□ -1.12
CPSF4-211ENST00000471455 MAP3K8P41279 467 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 OR3A2P47893 321 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 CASP9P55211 416 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 RAC3P60763 192 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 POU6F2P78424 691 aaPredicted RBP8.08□□□□□ -1.12
CPSF4-211ENST00000471455 TSC22D1Q15714 1073 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 DUSP5Q16690 384 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 TMEM249Q2WGJ8 235 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 PGGHGQ32M88 737 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 TMEM176BQ3YBM2 270 aaPredicted RBP8.08□□□□□ -1.12
CPSF4-211ENST00000471455 TIMM23BQ5SRD1 257 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 NUFIP2Q7Z417 695 aaKnown RBP8.08□□□□□ -1.12
CPSF4-211ENST00000471455 R3HCC1LQ7Z5L2 792 aaKnown RBP8.08□□□□□ -1.12
CPSF4-211ENST00000471455 FBXL14Q8N1E6 418 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 FBXO30Q8TB52 745 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 POC1BQ8TC44 478 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 FAM110BQ8TC76 370 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 PHOSPHO1Q8TCT1 267 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 IFT81Q8WYA0 676 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 STACQ99469 402 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 BTBD2Q9BX70 525 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 SRXN1Q9BYN0 137 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 SHARPINQ9H0F6 387 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 GSTO2Q9H4Y5 243 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 REEP4Q9H6H4 257 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 BCO1Q9HAY6 547 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 NPHS2Q9NP85 383 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 DUSP22Q9NRW4 184 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 C1orf109Q9NX04 203 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 EMC3Q9P0I2 261 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 SH3BP4Q9P0V3 963 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 NTMQ9P121 344 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 DCDC2Q9UHG0 476 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 POU2F3Q9UKI9 436 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 TMED5Q9Y3A6 229 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 PCNX3Q9H6A9 2034 aa8.08□□□□□ -1.12
CPSF4-211ENST00000471455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.07□□□□□ -1.127e-9■■■■□ 23.3
CPSF4-211ENST00000471455 DPRXA6NFQ7 191 aa8.07□□□□□ -1.12
CPSF4-211ENST00000471455 ZNF724A8MTY0 619 aa8.07□□□□□ -1.12
CPSF4-211ENST00000471455 NPIPB8E9PQR5 432 aa8.07□□□□□ -1.12
CPSF4-211ENST00000471455 GTPBP1O00178 669 aaKnown RBP8.07□□□□□ -1.12
CPSF4-211ENST00000471455 ABCD4O14678 606 aa8.07□□□□□ -1.12
CPSF4-211ENST00000471455 GLRA3O75311 464 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms