RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SLC6A13Q9NSD5 602 aa19.49■□□□□ 0.71
LIME1-203ENST00000465591 TESMINQ9Y4I5 508 aa19.49■□□□□ 0.71
LIME1-203ENST00000465591 GPC6Q9Y625 555 aaPredicted RBP19.49■□□□□ 0.71
LIME1-203ENST00000465591 ITPR3Q14573 2671 aa19.49■□□□□ 0.71
LIME1-203ENST00000465591 CCDC154A6NI56 674 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 SLCO1B7G3V0H7 640 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 HMGN4O00479 90 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 KLF11O14901 512 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 DNAJA2O60884 412 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 HRGP04196 525 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 ADH6P28332 368 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 CHI3L1P36222 383 aaPredicted RBP19.48■□□□□ 0.71
LIME1-203ENST00000465591 KHKP50053 298 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 QPRTQ15274 297 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 SLC25A53Q5H9E4 307 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 ATP6V1C2Q8NEY4 427 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 ROBO4Q8WZ75 1007 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 PANX1Q96RD7 426 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 THUMPD3Q9BV44 507 aaKnown RBP19.48■□□□□ 0.71
LIME1-203ENST00000465591 LAT2Q9GZY6 243 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 SAP130Q9H0E3 1048 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 ST6GALNAC2Q9UJ37 374 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 MCTS1Q9ULC4 181 aaKnown RBP19.48■□□□□ 0.71
LIME1-203ENST00000465591 PROCRQ9UNN8 238 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 WDR45Q9Y484 360 aa19.48■□□□□ 0.71
LIME1-203ENST00000465591 ETV2O00321 342 aaPredicted RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 SS18L1O75177 396 aaPredicted RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 CYP7B1O75881 506 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 SYNGR4O95473 234 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 UBTFL6P0CB48 400 aaPredicted RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 ART1P52961 327 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 CARD18P57730 90 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 FGFBP1Q14512 234 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 TMEM176BQ3YBM2 270 aaPredicted RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 PDCD4Q53EL6 469 aaKnown RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 TTMPQ5BVD1 217 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 COX20Q5RI15 118 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 ATAD3BQ5T9A4 648 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 AP1ARQ63HQ0 302 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 SPNS3Q6ZMD2 512 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 C22orf34Q6ZV56 151 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 GOLGA6L1Q8N7Z2 621 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 TOR1AIP2Q8NFQ8 470 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 PIWIL2Q8TC59 973 aaKnown RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 GMPPAQ96IJ6 420 aaPredicted RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 MRGPRX4Q96LA9 322 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 WFIKKN1Q96NZ8 548 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 QRSL1Q9H0R6 528 aaKnown RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 CCM2LQ9NUG4 571 aaPredicted RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 PAQR5Q9NXK6 330 aaPredicted RBP19.47■□□□□ 0.71
LIME1-203ENST00000465591 KLHL28Q9NXS3 571 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 PLEKHA6Q9Y2H5 1048 aa19.47■□□□□ 0.71
LIME1-203ENST00000465591 CLDN24A6NM45 220 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 SIAH2O43255 324 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 AGR2O95994 175 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 CSTAP01040 98 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 GUSBP08236 651 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 POU2F1P14859 743 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 IDO1P14902 403 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 UGT2B10P36537 528 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 PGM1P36871 562 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 PCYT1AP49585 367 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 CHRNEQ04844 493 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 SYPL1Q16563 259 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 ZNF239Q16600 458 aaKnown RBP19.46■□□□□ 0.71
LIME1-203ENST00000465591 DNAJC14Q6Y2X3 702 aaPredicted RBP19.46■□□□□ 0.71
LIME1-203ENST00000465591 ZNF621Q6ZSS3 439 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 ZNF619Q8N2I2 560 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 ANKFN1Q8N957 763 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 FAM71CQ8NEG0 241 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 OR9I1Q8NGQ6 314 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 PNPT1Q8TCS8 783 aaKnown RBP19.46■□□□□ 0.71
LIME1-203ENST00000465591 ZBTB18Q99592 522 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 PLEKHF2Q9H8W4 249 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 ROS1P08922 2347 aa19.46■□□□□ 0.71
LIME1-203ENST00000465591 SLC22A3O75751 556 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 H6PDO95479 791 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 PLGP00747 810 aaPredicted RBP19.45■□□□□ 0.7
LIME1-203ENST00000465591 CHRM4P08173 479 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 CBFBQ13951 182 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 GPAT3Q53EU6 434 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 PDSS1Q5T2R2 415 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 FBXW10Q5XX13 1052 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 ZNF550Q7Z398 422 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 GLB1L3Q8NCI6 653 aaPredicted RBP19.45■□□□□ 0.7
LIME1-203ENST00000465591 OR6K3Q8NGY3 331 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 RNF128Q8TEB7 428 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 ABHD3Q8WU67 409 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 SLCO1B3Q9NPD5 702 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 POLE3Q9NRF9 147 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 SDR39U1Q9NRG7 319 aaPredicted RBP19.45■□□□□ 0.7
LIME1-203ENST00000465591 PLSCR4Q9NRQ2 329 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 ELOVL5Q9NYP7 299 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 EMC9Q9Y3B6 208 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 USH1CQ9Y6N9 552 aa19.45■□□□□ 0.7
LIME1-203ENST00000465591 MAP1AP78559 2803 aaPredicted RBP19.45■□□□□ 0.7
LIME1-203ENST00000465591 A0A1W2PNR3 127 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 DIAPH2O60879 1101 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 ADAM11O75078 769 aa19.44■□□□□ 0.7
LIME1-203ENST00000465591 KLK2P20151 261 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms