RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 P2RY14Q15391 338 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 SF3A2Q15428 464 aaKnown RBP8.48□□□□□ -1.05
HPS4-208ENST00000464362 FCN2Q15485 313 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 PCGF3Q3KNV8 242 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 PLK5Q496M5 336 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 FAM78AQ5JUQ0 283 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 FAM27D1Q5T7N8 215 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 PRSS45Q7RTY3 260 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 CDRT4Q8N9R6 151 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 OR52R1Q8NGF1 315 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 THAP6Q8TBB0 222 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 ZDHHC1Q8WTX9 485 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 CCDC107Q8WV48 283 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 ADOQ96SZ5 270 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 ALKBH4Q9NXW9 302 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 APOBEC3BQ9UH17 382 aaKnown RBP8.48□□□□□ -1.05
HPS4-208ENST00000464362 GPR34Q9UPC5 381 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 CNOT1A5YKK6 2376 aaKnown RBP8.48□□□□□ -1.05
HPS4-208ENST00000464362 CACNA1EQ15878 2313 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 A0A0G2JMP0 313 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 MAKP20794 623 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 S1PR1P21453 382 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 PTPN6P29350 595 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 CCR6P51684 374 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 HCCSP53701 268 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 MAT1AQ00266 395 aaKnown RBP8.48□□□□□ -1.05
HPS4-208ENST00000464362 SELENBP1Q13228 472 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 BAK1Q16611 211 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 CDNFQ49AH0 187 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 SLX4IPQ5VYV7 408 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 FCRLAQ7L513 359 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 FRMD1Q8N878 549 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 OR4M2Q8NGB6 313 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 ACOT12Q8WYK0 555 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 FAM46BQ96A09 425 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 ZDHHC5Q9C0B5 715 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 IL21Q9HBE4 155 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 AKIP1Q9NQ31 210 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 MBNL1Q9NR56 388 aaKnown RBP8.48□□□□□ -1.05
HPS4-208ENST00000464362 FKBP14Q9NWM8 211 aa8.48□□□□□ -1.05
HPS4-208ENST00000464362 SIDT1Q9NXL6 827 aaKnown RBP8.48□□□□□ -1.05
HPS4-208ENST00000464362 H0Y8X5 98 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 LRRTM2O43300 516 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 TEAD1P28347 426 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 HOXD11P31277 338 aaPredicted RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 TM4SF4P48230 202 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 VASPP50552 380 aaPredicted RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 ART1P52961 327 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 TANGO2Q6ICL3 276 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 OR6N1Q8NGY5 312 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 NR4A3Q92570 626 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 SAMD11Q96NU1 681 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 PDCD1LG2Q9BQ51 273 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 C1QTNF2Q9BXJ5 285 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 SLIRPQ9GZT3 109 aaKnown RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 TMEM38AQ9H6F2 299 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 IL23AQ9NPF7 189 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ACSS1Q9NUB1 689 aaPredicted RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 ACTR10Q9NZ32 417 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 EPHA6Q9UF33 1036 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 A0A1B0GV50 99 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 A0A1W2PPL8 197 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ZNF726A6NNF4 738 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 H3BML4 177 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 HMGN4O00479 90 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 POLR1CO15160 346 aaPredicted RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 RP2O75695 350 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 AMY2AP04746 511 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ARSBP15848 533 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ENDOUP21128 410 aaKnown RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 MAPK3P27361 379 aaPredicted RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 GJA4P35212 333 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 BCL6P41182 706 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 NRG3P56975 720 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 BEX5Q5H9J7 111 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 LYPD4Q6UWN0 246 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 SLC16A12Q6ZSM3 486 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ADIPOR2Q86V24 386 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ZNF511Q8NB15 262 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 NPRL2Q8WTW4 380 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 PATE1Q8WXA2 126 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ORAI1Q96D31 301 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 PDXPQ96GD0 296 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 MICU1Q9BPX6 476 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 METTL17Q9H7H0 456 aaPredicted RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 RBFOX1Q9NWB1 397 aaKnown RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 ASIC5Q9NY37 505 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 SPHK1Q9NYA1 384 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 NEU3Q9UQ49 428 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 ZNF443Q9Y2A4 671 aaPredicted RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 M0R082 166 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 HRO43593 1189 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 RBMXL2O75526 392 aaKnown RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 PROS1P07225 676 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 GPR143P51810 404 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 SNTA1Q13424 505 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 NSDHLQ15738 373 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 TRMT12Q53H54 448 aaKnown RBP8.47□□□□□ -1.05
HPS4-208ENST00000464362 CFAP77Q6ZQR2 320 aa8.47□□□□□ -1.05
HPS4-208ENST00000464362 SLC35D2Q76EJ3 337 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms