RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 C14orf105Q9NVL8 296 aa14.8□□□□□ -0.04
SHQ1-202ENST00000444040 MALT1Q9UDY8 824 aa14.8□□□□□ -0.04
SHQ1-202ENST00000444040 TRAV27A0A087WT01 109 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 DAPL1A0PJW8 107 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 SLC22A31A6NKX4 558 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 PRR23D1E9PI22 279 aaPredicted RBP14.79□□□□□ -0.04
SHQ1-202ENST00000444040 CHP2O43745 196 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 CTSBP07858 339 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 SLC35E2P0CK97 266 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 PRR23D2P0DMB1 279 aaPredicted RBP14.79□□□□□ -0.04
SHQ1-202ENST00000444040 SLC2A5P22732 501 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 NOS3P29474 1203 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 MZT2AQ6P582 158 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 ZNF438Q7Z4V0 828 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 UBE2J2Q8N2K1 259 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 ARHGEF39Q8N4T4 335 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 GRHL3Q8TE85 626 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 MARCH7Q9H992 704 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 FAM60AQ9NP50 221 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 SLC35A3Q9Y2D2 325 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 PCDHGB7Q9Y5F8 929 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 RDH16O75452 317 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 GABRG2P18507 467 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 ACAA2P42765 397 aaKnown RBP14.79□□□□□ -0.04
SHQ1-202ENST00000444040 MTNR1BP49286 362 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 FHL1Q13642 323 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 ZC3H14Q6PJT7 736 aaKnown RBP14.79□□□□□ -0.04
SHQ1-202ENST00000444040 ABI3BPQ7Z7G0 1075 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 GRAMD2AQ8IUY3 354 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 FRMD1Q8N878 549 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 OR51A7Q8NH64 312 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 PPIL3Q9H2H8 161 aaKnown RBP14.79□□□□□ -0.04
SHQ1-202ENST00000444040 RNF121Q9H920 327 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 INPP5EQ9NRR6 644 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 WDR70Q9NW82 654 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 TCRBV21S2A2A0A5A6 115 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 E9PI62 339 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 RGS13O14921 159 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 TBRG1Q3YBR2 411 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 FCRLBQ6BAA4 426 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 ZNF761Q86XN6 746 aaPredicted RBP14.79□□□□□ -0.04
SHQ1-202ENST00000444040 OR10H4Q8NGA5 316 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 OR5W2Q8NH69 310 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 OR51V1Q9H2C8 321 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 KCNN2Q9H2S1 579 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 TRIM36Q9NQ86 728 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 USP36Q9P275 1121 aaKnown RBP14.79□□□□□ -0.04
SHQ1-202ENST00000444040 ZMIZ1Q9ULJ6 1067 aa14.79□□□□□ -0.04
SHQ1-202ENST00000444040 KIR2DS5A0A0G2JLQ3 304 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 A0A0G2JNG1 304 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 A0A1B0GWA3 101 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 A8MV72 311 aaPredicted RBP14.78□□□□□ -0.04
SHQ1-202ENST00000444040 KIR2DS3K7RE56 304 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 HRO43593 1189 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 IGKV1D-16P01601 117 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 NGFRP08138 427 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 SBK2P0C263 348 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 FAM157BP0CG42 384 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 CLUP10909 449 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 MYL9P24844 172 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 EMDP50402 254 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 CSTF1Q05048 431 aaKnown RBP14.78□□□□□ -0.04
SHQ1-202ENST00000444040 IL18Q14116 193 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 KIR2DS5Q14953 304 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 ZNF542PQ5EBM4 170 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 PRR23CQ6ZRP0 262 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 TRILQ7L0X0 811 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 SLC7A6Q92536 515 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 ZC3HAV1LQ96H79 300 aaKnown RBP14.78□□□□□ -0.04
SHQ1-202ENST00000444040 FRMD6Q96NE9 622 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 PTCHD1Q96NR3 888 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 SNX18Q96RF0 628 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 KCNJ15Q99712 375 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 LMF2Q9BU23 707 aaKnown RBP14.78□□□□□ -0.04
SHQ1-202ENST00000444040 OR2B2Q9GZK3 357 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 SYNDIG1Q9H7V2 258 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 EVA1AQ9H8M9 152 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 ADGRL4Q9HBW9 690 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 DNAJB12Q9NXW2 375 aaKnown RBP14.78□□□□□ -0.04
SHQ1-202ENST00000444040 FBXL4Q9UKA2 621 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 PLPP2O43688 288 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 IGHV4-34P06331 123 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 CHRNB1P11230 501 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 RABIFP47224 123 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 RFX3P48380 749 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 EIF2B5Q13144 721 aaKnown RBP14.78□□□□□ -0.04
SHQ1-202ENST00000444040 CRMP1Q14194 572 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 OR4N2Q8NGD1 307 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 OR9A4Q8NGU2 314 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 TNFRSF13CQ96RJ3 184 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 TMEM43Q9BTV4 400 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 GSDMCQ9BYG8 508 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 SLC28A3Q9HAS3 691 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 CAPN10Q9HC96 672 aa14.78□□□□□ -0.04
SHQ1-202ENST00000444040 COL4A2P08572 1712 aa14.77□□□□□ -0.04
SHQ1-202ENST00000444040 OR5K3A6NET4 321 aa14.77□□□□□ -0.04
SHQ1-202ENST00000444040 OR5K4A6NMS3 321 aa14.77□□□□□ -0.04
SHQ1-202ENST00000444040 COQ9O75208 318 aa14.77□□□□□ -0.04
SHQ1-202ENST00000444040 SEMA4FO95754 770 aa14.77□□□□□ -0.04
SHQ1-202ENST00000444040 MRPL3P09001 348 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms