RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 BTNL2Q9UIR0 455 aa17.99■□□□□ 0.47
LRCH3-208ENST00000443727 WDR45Q9Y484 360 aa17.99■□□□□ 0.47
LRCH3-208ENST00000443727 TESMINQ9Y4I5 508 aa17.99■□□□□ 0.47
LRCH3-208ENST00000443727 CCDC154A6NI56 674 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 C16orf97H3BN30 126 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 PGRP06401 933 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 PRKCAP17252 672 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 UGT2B10P36537 528 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 PCYT1AP49585 367 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 LRRC74AQ0VAA2 488 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 QPRTQ15274 297 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 GUSBP1Q15486 140 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 GPAT3Q53EU6 434 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 HEPHL1Q6MZM0 1159 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 OR6K3Q8NGY3 331 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 ROPN1LQ96C74 230 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 WFIKKN1Q96NZ8 548 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 THUMPD3Q9BV44 507 aaKnown RBP17.98■□□□□ 0.47
LRCH3-208ENST00000443727 KLHL4Q9C0H6 718 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 LAT2Q9GZY6 243 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 GPR45Q9Y5Y3 372 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 CELSR1Q9NYQ6 3014 aa17.98■□□□□ 0.47
LRCH3-208ENST00000443727 SS18L1O75177 396 aaPredicted RBP17.97■□□□□ 0.47
LRCH3-208ENST00000443727 UGT2B17O75795 530 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 HRGP04196 525 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 UBTFL6P0CB48 400 aaPredicted RBP17.97■□□□□ 0.47
LRCH3-208ENST00000443727 IDO1P14902 403 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 SHC1P29353 583 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 SLC7A1P30825 629 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 ANXA11P50995 505 aaKnown RBP17.97■□□□□ 0.47
LRCH3-208ENST00000443727 SELENBP1Q13228 472 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 ZNF621Q6ZSS3 439 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 STK32CQ86UX6 486 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 RNF130Q86XS8 419 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 GLB1L3Q8NCI6 653 aaPredicted RBP17.97■□□□□ 0.47
LRCH3-208ENST00000443727 ROBO4Q8WZ75 1007 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 CPNE4Q96A23 557 aaPredicted RBP17.97■□□□□ 0.47
LRCH3-208ENST00000443727 ARSGQ96EG1 525 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 FANCFQ9NPI8 374 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 POLE3Q9NRF9 147 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 KCNE5Q9UJ90 142 aa17.97■□□□□ 0.47
LRCH3-208ENST00000443727 HIVEP1P15822 2718 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 CENPVL1A0A0U1RR11 272 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 EFNA2O43921 213 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 KIAA0513O60268 411 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 SLC22A3O75751 556 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 IL12AP29459 219 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 SKP2Q13309 424 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 KEAP1Q14145 624 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 TYW3Q6IPR3 259 aaKnown RBP17.96■□□□□ 0.47
LRCH3-208ENST00000443727 PAMR1Q6UXH9 720 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 ZNF619Q8N2I2 560 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 ZFP90Q8TF47 636 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 TMEM234Q8WY98 164 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 ZC3HAV1LQ96H79 300 aaKnown RBP17.96■□□□□ 0.47
LRCH3-208ENST00000443727 MARK4Q96L34 752 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 FOXC2Q99958 501 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 INPP5KQ9BT40 448 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 PLSCR4Q9NRQ2 329 aa17.96■□□□□ 0.47
LRCH3-208ENST00000443727 ABCA4P78363 2273 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 RAF1P04049 648 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 GSNP06396 782 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 PGCP20142 388 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 RNPS1Q15287 305 aaKnown RBP17.95■□□□□ 0.46
LRCH3-208ENST00000443727 ZNF239Q16600 458 aaKnown RBP17.95■□□□□ 0.46
LRCH3-208ENST00000443727 TIGD2Q4W5G0 525 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 SLC9B1Q4ZJI4 515 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 TMEM201Q5SNT2 666 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 AGBL2Q5U5Z8 902 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 ANKRD34AQ69YU3 496 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 PIWIL2Q8TC59 973 aaKnown RBP17.95■□□□□ 0.46
LRCH3-208ENST00000443727 OIT3Q8WWZ8 545 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 ST8SIA1Q92185 356 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 ZNF75CPQ92670 426 aaPredicted RBP17.95■□□□□ 0.46
LRCH3-208ENST00000443727 SRXN1Q9BYN0 137 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 C12orf49Q9H741 205 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 SERINC1Q9NRX5 453 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 C6orf203Q9P0P8 240 aaPredicted RBP17.95■□□□□ 0.46
LRCH3-208ENST00000443727 SLC35A3Q9Y2D2 325 aa17.95■□□□□ 0.46
LRCH3-208ENST00000443727 HRNRQ86YZ3 2850 aaPredicted RBP17.94■□□□□ 0.46
LRCH3-208ENST00000443727 HMGN4O00479 90 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 RFXANKO14593 260 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 DIAPH2O60879 1101 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 H6PDO95479 791 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 NTN1O95631 604 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 IL6P05231 212 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 GUSBP08236 651 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 CDKN2CP42773 168 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 TXNL4AP83876 142 aaKnown RBP17.94■□□□□ 0.46
LRCH3-208ENST00000443727 MERTKQ12866 999 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 MAPK14Q16539 360 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 GSTA3Q16772 222 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 PDCD4Q53EL6 469 aaKnown RBP17.94■□□□□ 0.46
LRCH3-208ENST00000443727 SLC25A53Q5H9E4 307 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 FCRLAQ7L513 359 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 ZNF550Q7Z398 422 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 HMGN2P46Q86SG4 172 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 ZNF563Q8TA94 476 aa17.94■□□□□ 0.46
LRCH3-208ENST00000443727 PNPT1Q8TCS8 783 aaKnown RBP17.94■□□□□ 0.46
LRCH3-208ENST00000443727 ABHD3Q8WU67 409 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms