RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SHANK1Q9Y566 2161 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 H7C4K7 107 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CSF1P09603 554 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GTF2F2P13984 249 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 EIF2S3P41091 472 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 ZP1P60852 638 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 PON3Q15166 354 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ZNF660Q6AZW8 331 aaPredicted RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR5M10Q6IEU7 315 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ARMC10Q8N2F6 343 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 EFCAB11Q9BUY7 163 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 PLA2G12AQ9BZM1 189 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 SYNPO2LQ9H987 977 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TMEM72A0PK05 275 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR6C68A6NDL8 312 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 RBBP9O75884 186 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 IFNA10P01566 189 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GAAP10253 952 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GABRA1P14867 456 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 MC1RQ01726 317 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 VGLL4Q14135 290 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 SLCO4C1Q6ZQN7 724 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR1S1Q8NH92 325 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CD300LFQ8TDQ1 290 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 C3orf49Q96BT1 292 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 MED20Q9H944 212 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 MAFFQ9ULX9 164 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ASF1AQ9Y294 204 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR2M5A3KFT3 312 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 RFPL4AA6NLU0 287 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 KDM4EB2RXH2 506 aaPredicted RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 RFPL4AL1F8VTS6 287 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 SYT5O00445 386 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 CD63P08962 238 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ATP5A1P25705 553 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 SERPINA4P29622 427 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 DOC2BQ14184 412 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 SERPINA13PQ6UXR4 307 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 NRMQ8IXM6 262 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 EID2Q8N6I1 236 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 C10orf53Q8N6V4 93 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 PAQR8Q8TEZ7 354 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 MVB12BQ9H7P6 319 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TXNRD2Q9NNW7 524 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 RPS10P5Q9NQ39 176 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ZFP57Q9NU63 452 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 DSPPQ9NZW4 1301 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ENTPD4Q9Y227 616 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 TFPIP10646 304 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 IRF1P10914 325 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 RPA2P15927 270 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR2B8PP59922 312 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 RBMS2Q15434 407 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 ZC3H14Q6PJT7 736 aaKnown RBP4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR5M1Q8NGP8 315 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 OR4Q3Q8NH05 313 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 GLYATL2Q8WU03 294 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 PRRC1Q96M27 445 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 NEUROD4Q9HD90 331 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 DCAF16Q9NXF7 216 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 KCNK7Q9Y2U2 307 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 ZNF281Q9Y2X9 895 aa4.69□□□□□ -1.66
HERC1-201ENST00000443617 EIF1BO60739 113 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 ZDHHC11BP0C7U3 371 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 BMP7P18075 431 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 EIF1P41567 113 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 EIF5AL1Q6IS14 154 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 THAP4Q8WY91 577 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 PLD4Q96BZ4 506 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 TMEM41AQ96HV5 264 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 GJD4Q96KN9 370 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 CA10Q9NS85 328 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 PYCARD-AS1I3L0S3 204 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 FARS2O95363 451 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 OR4Q2P0C623 313 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 FCRLAQ7L513 359 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SUN3Q8TAQ9 357 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 WDR89Q96FK6 387 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 RPH3AQ9Y2J0 694 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 LAMB1P07942 1786 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 C13orf42A0A1B0GVH6 325 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 AGPAT2O15120 278 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 MTX2O75431 263 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 NDUFB6O95139 128 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 FURINP09958 794 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 PRKXP51817 358 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 HABP2Q14520 560 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 FRRS1Q6ZNA5 592 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ISG20L2Q9H9L3 353 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 ADARB2Q9NS39 739 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 DZANK1Q9NVP4 752 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ARFGEF1Q9Y6D6 1849 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 EIF1AYO14602 144 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 SMAD9O15198 467 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 BCL2L11O43521 198 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ATF1P18846 271 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 EIF1AXP47813 144 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 DHRS7BQ6IAN0 325 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 SLC2A12Q8TD20 617 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 CHST8Q9H2A9 424 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms