RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 FAM109BQ6ICB4 259 aaPredicted RBP15.63■□□□□ 0.09
PMS1-213ENST00000441310 FBXO46Q6PJ61 603 aaPredicted RBP15.63■□□□□ 0.09
PMS1-213ENST00000441310 OR52B4Q8NGK2 314 aa15.63■□□□□ 0.09
PMS1-213ENST00000441310 SLC38A5Q8WUX1 472 aa15.63■□□□□ 0.09
PMS1-213ENST00000441310 FNDC11Q9BVV2 318 aa15.63■□□□□ 0.09
PMS1-213ENST00000441310 EMC3Q9P0I2 261 aa15.63■□□□□ 0.09
PMS1-213ENST00000441310 ATP1B2P14415 290 aaPredicted RBP15.63■□□□□ 0.09
PMS1-213ENST00000441310 TIA1P31483 386 aaKnown RBP eCLIP15.63■□□□□ 0.09
PMS1-213ENST00000441310 C21orf58P58505 322 aa15.63■□□□□ 0.09
PMS1-213ENST00000441310 ZNF77Q15935 545 aa15.63■□□□□ 0.09
PMS1-213ENST00000441310 ZNF322Q6U7Q0 402 aaPredicted RBP15.63■□□□□ 0.09
PMS1-213ENST00000441310 NAXDQ8IW45 347 aa15.63■□□□□ 0.09
PMS1-213ENST00000441310 CPEB1Q9BZB8 566 aaKnown RBP15.63■□□□□ 0.09
PMS1-213ENST00000441310 BHLHE41Q9C0J9 482 aaPredicted RBP15.63■□□□□ 0.09
PMS1-213ENST00000441310 NIT2Q9NQR4 276 aa15.63■□□□□ 0.09
PMS1-213ENST00000441310 KNL1Q8NG31 2342 aa15.63■□□□□ 0.09
PMS1-213ENST00000441310 DENND4AQ7Z401 1863 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 TIMP2P16035 220 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 TBXA2RP21731 343 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 CCR8P51685 355 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 PFN3P60673 137 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 RPS13P62277 151 aaKnown RBP15.62■□□□□ 0.09
PMS1-213ENST00000441310 POLR2LP62875 67 aaKnown RBP15.62■□□□□ 0.09
PMS1-213ENST00000441310 OLIG3Q7RTU3 272 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 CAMKMTQ7Z624 323 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 CEACAM19Q7Z692 300 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 ASPGQ86U10 573 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 LDLRAD3Q86YD5 345 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 CMIPQ8IY22 773 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 KCTD12Q96CX2 325 aaKnown RBP15.62■□□□□ 0.09
PMS1-213ENST00000441310 RSPRY1Q96DX4 576 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 BTBD1Q9H0C5 482 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 IL20RAQ9UHF4 553 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 LHX6Q9UPM6 363 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 LINC01553A4QN01 128 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 WASH3PC4AMC7 463 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 GNB5O14775 395 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 PRAMEF2O60811 474 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 NFATC1O95644 943 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 HIST1H2ABP04908 130 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 H2AFB1P0C5Y9 115 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 EN2P19622 333 aaPredicted RBP15.62■□□□□ 0.09
PMS1-213ENST00000441310 SLC3A1Q07837 685 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 DHCR24Q15392 516 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 RBMS3Q6XE24 437 aaKnown RBP15.62■□□□□ 0.09
PMS1-213ENST00000441310 HIST3H2AQ7L7L0 130 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 LINGO2Q7L985 606 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 PUSL1Q8N0Z8 303 aaKnown RBP15.62■□□□□ 0.09
PMS1-213ENST00000441310 OR51G2Q8NGK0 314 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 HIST1H2ACQ93077 130 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 DDX31Q9H8H2 851 aaKnown RBP15.62■□□□□ 0.09
PMS1-213ENST00000441310 EYSQ5T1H1 3165 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 A0A1W2PRB8 838 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 PRAF2O60831 178 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 ACP5P13686 325 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 CCR9P51686 369 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 PITPNAQ00169 270 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 UBXN2BQ14CS0 331 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 PRSS53Q2L4Q9 553 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 SLC30A6Q6NXT4 461 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 MMP21Q8N119 569 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 SLC12A9Q9BXP2 914 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 HRASLSQ9HDD0 168 aa15.62■□□□□ 0.09
PMS1-213ENST00000441310 A0A1B0GUH1 482 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 OR2M5A3KFT3 312 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 NTN1O95631 604 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 UCHL1P09936 223 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 GAAP10253 952 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 UBE2MP61081 183 aaKnown RBP15.61■□□□□ 0.09
PMS1-213ENST00000441310 CCSMST1Q4G0I0 132 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 OR5M1Q8NGP8 315 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 GOT1L1Q8NHS2 421 aaPredicted RBP15.61■□□□□ 0.09
PMS1-213ENST00000441310 ELP4Q96EB1 424 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 MRGPRX3Q96LB0 322 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 TMEM106CQ9BVX2 250 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 NOX3Q9HBY0 568 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 PRDM9Q9NQV7 894 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 CNIH4Q9P003 139 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 OTOL1A6NHN0 477 aaPredicted RBP15.61■□□□□ 0.09
PMS1-213ENST00000441310 CREBL2O60519 120 aaPredicted RBP15.61■□□□□ 0.09
PMS1-213ENST00000441310 GPR37L1O60883 481 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 SERPINA3P01011 423 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 RFC3P40938 356 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 CENPAP49450 140 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 GUCA2BQ16661 112 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 APOOLQ6UXV4 268 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 SERPINA12Q8IW75 414 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 C7orf61Q8IZ16 206 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 TMEM185AQ8NFB2 350 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 KAT2AQ92830 837 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 SLC25A28Q96A46 364 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 C7orf50Q9BRJ6 194 aaKnown RBP15.61■□□□□ 0.09
PMS1-213ENST00000441310 A4GNTQ9UNA3 340 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 OR10H1Q9Y4A9 318 aa15.61■□□□□ 0.09
PMS1-213ENST00000441310 CDC123O75794 336 aaPredicted RBP15.6■□□□□ 0.09
PMS1-213ENST00000441310 RBMS2Q15434 407 aaKnown RBP15.6■□□□□ 0.09
PMS1-213ENST00000441310 COMTD1Q86VU5 262 aa15.6■□□□□ 0.09
PMS1-213ENST00000441310 TMEM17Q86X19 198 aa15.6■□□□□ 0.09
PMS1-213ENST00000441310 POGLUT1Q8NBL1 392 aa15.6■□□□□ 0.09
PMS1-213ENST00000441310 OR6S1Q8NH40 331 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms