RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ENAMQ9NRM1 1142 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ZMIZ1Q9ULJ6 1067 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 RASD1Q9Y272 281 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 SIGLEC7Q9Y286 467 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 SLC22A31A6NKX4 558 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 J3QLW9 94 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 PAHP00439 452 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 MT-ND5P03915 603 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 EIF4EP06730 217 aaKnown RBP10.93□□□□□ -0.66
CD44-209ENST00000433892 CT62P0C5K7 136 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 TFPIP10646 304 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ZNF19P17023 458 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ZNF24P17028 368 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 NTSR1P30989 418 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ACVR1BP36896 505 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 AGFG1P52594 562 aaKnown RBP10.93□□□□□ -0.66
CD44-209ENST00000433892 SHC2P98077 582 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 PLAURQ03405 335 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 CRMP1Q14194 572 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 GPR18Q14330 331 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 AMZ1Q400G9 498 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 GARNL3Q5VVW2 1013 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ZC3H14Q6PJT7 736 aaKnown RBP10.93□□□□□ -0.66
CD44-209ENST00000433892 CEACAM19Q7Z692 300 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ZNF614Q8N883 585 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 CDRT4Q8N9R6 151 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 OR5M3Q8NGP4 307 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 AHCYL2Q96HN2 611 aaKnown RBP10.93□□□□□ -0.66
CD44-209ENST00000433892 C4orf36Q96KX1 117 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 SMAD5Q99717 465 aaKnown RBP10.93□□□□□ -0.66
CD44-209ENST00000433892 TRPV5Q9NQA5 729 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 DUSP22Q9NRW4 184 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 CYSLTR2Q9NS75 346 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 MCUBQ9NWR8 336 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ACTR10Q9NZ32 417 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 MAT2BQ9NZL9 334 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 KLHL21Q9UJP4 597 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 MED31Q9Y3C7 131 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 MAU2Q9Y6X3 613 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 MYO9BQ13459 2157 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 A0A1W2PQF6 199 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 CENPBD1B2RD01 187 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 H0YGG7 62 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 TNFSF14O43557 240 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 ORC5O43913 435 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 CPNE3O75131 537 aaKnown RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 PPP1R3DO95685 299 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 ATP1B1P05026 303 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 ARSBP15848 533 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 ZNF10P21506 573 aaPredicted RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 F8A1P23610 371 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 THBS2P35442 1172 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 TALDO1P37837 337 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 OR12D2P58182 307 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 ARF3P61204 181 aaPredicted RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 FAPQ12884 760 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 NFATC4Q14934 902 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 SFXN4Q6P4A7 337 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 TMPRSS11FQ6ZWK6 438 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 LRRC28Q86X40 367 aaPredicted RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 CAMKVQ8NCB2 501 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 OR4C6Q8NH72 309 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 ABHD4Q8TB40 342 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 PATE1Q8WXA2 126 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 FAM3CQ92520 227 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 FAM131CQ96AQ9 280 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 TTTY10Q9BZA0 68 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 SLA2Q9H6Q3 261 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 ADGRL4Q9HBW9 690 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 GALNT9Q9HCQ5 603 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 RPRD1BQ9NQG5 326 aaKnown RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 KLHL1Q9NR64 748 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 PILRAQ9UKJ1 303 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 SATB2Q9UPW6 733 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 ARHGEF17Q96PE2 2063 aaPredicted RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 RIIAD1A6NNX1 92 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 INMT-MINDY4F8WBC2 141 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 SMLR1H3BR10 107 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 PLPP2O43688 288 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 PLOD3O60568 738 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 SLC43A1O75387 559 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 SBK2P0C263 348 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 HOXB2P14652 356 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 GPR176Q14439 515 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 PRICKLE4Q2TBC4 344 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 TMEM31Q5JXX7 168 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 EXOSC6Q5RKV6 272 aaKnown RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 THOC7Q6I9Y2 204 aaKnown RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 CNOT9Q92600 299 aaKnown RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 RERGQ96A58 199 aaPredicted RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 BMFQ96LC9 184 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 WDR92Q96MX6 357 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 PTCHD1Q96NR3 888 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 TNFRSF13CQ96RJ3 184 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 UBL7Q96S82 380 aaPredicted RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 ZFYVE21Q9BQ24 234 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 THAP7Q9BT49 309 aaPredicted RBP10.92□□□□□ -0.66
CD44-209ENST00000433892 IL21RQ9HBE5 538 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 STARD5Q9NSY2 213 aa10.92□□□□□ -0.66
CD44-209ENST00000433892 SLC35A3Q9Y2D2 325 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms