RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ABLIM3O94929 683 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 NFATC1O95644 943 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 HPP00738 406 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 RLN1P04808 185 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 GSTM3P21266 225 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 EPHB3P54753 998 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 HFEQ30201 348 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 KIAA1211LQ6NV74 962 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 MORN4Q8NDC4 146 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 ABHD4Q8TB40 342 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 EXOSC8Q96B26 276 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 TOX2Q96NM4 488 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 MFFQ9GZY8 342 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 EXOSC3Q9NQT5 275 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 A0A0G2JK05 382 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 A0A1B0GUH1 482 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 MPTX1A8MV57 137 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 HIDE1A8MVS5 230 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 TO15178 435 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 NDUFS6O75380 124 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 CXCL14O95715 111 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 HIST1H2ABP04908 130 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 RNF144AP50876 292 aaPredicted RBP13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 FZD5Q13467 585 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 LINC00303Q3SY05 128 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 SYTL3Q4VX76 610 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 ACSM3Q53FZ2 586 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 ENTPD8Q5MY95 495 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 PIP5KL1Q5T9C9 394 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 AADACL4Q5VUY2 407 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 GAREM2Q75VX8 874 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 HIST3H2AQ7L7L0 130 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 SLC9B2Q86UD5 537 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZNF740Q8NDX6 193 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 HIST1H2ACQ93077 130 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 ARMC5Q96C12 935 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZNF649Q9BS31 505 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 GPN1Q9HCN4 374 aaPredicted RBP13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 TMEM138Q9NPI0 162 aa13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 HINT3Q9NQE9 182 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-204ENST00000416649 HMGN4O00479 90 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 SERPINA3P01011 423 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 TIMP1P01033 207 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 SPP1P10451 314 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 IFNGR1P15260 489 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 ADGRF1Q5T601 910 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 PRAMEF13Q5VWM6 474 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 B3GNTL1Q67FW5 361 aaPredicted RBP13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 FAM71E1Q6IPT2 247 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 GLDNQ6ZMI3 551 aaPredicted RBP13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 APCDD1Q8J025 514 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 C12orf45Q8N5I9 185 aaPredicted RBP13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 LGALS14Q8TCE9 139 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 BADQ92934 168 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 C7orf50Q9BRJ6 194 aaKnown RBP13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 TEX12Q9BXU0 123 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 CERS4Q9HA82 394 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 WBP1LQ9NX94 342 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 SH2B3Q9UQQ2 575 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 TRBV23-1A0A0A0MS06 115 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 GOSR2O14653 212 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 MYOGP15173 224 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 SORDQ00796 357 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 DYRK1AQ13627 763 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 C2orf68Q2NKX9 166 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 PAN3Q58A45 887 aaKnown RBP13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZDHHC20Q5W0Z9 365 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 CRTC1Q6UUV9 634 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 SMIM4Q8WVI0 70 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 SLC25A28Q96A46 364 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 ORAI1Q96D31 301 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 C10orf90Q96M02 699 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 PCDHGA5Q9Y5G8 931 aa13.68□□□□□ -0.22
NCKIPSD-204ENST00000416649 A0A1B0GW55 424 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 CDC123O75794 336 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DUX4L2P0CJ85 424 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DUX4L3P0CJ86 424 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DUX4L4P0CJ87 422 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DUX4L5P0CJ88 424 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DUX4L6P0CJ89 424 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DUX4L7P0CJ90 424 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 ATP1B2P14415 290 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 MST1P26927 711 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 TMEM17Q86X19 198 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 SFT2D1Q8WV19 159 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 RGMAQ96B86 450 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 CRISPLD2Q9H0B8 497 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR51V1Q9H2C8 321 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 MARK1Q9P0L2 795 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DUX4Q9UBX2 424 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 ACAD8Q9UKU7 415 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 LHX6Q9UPM6 363 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 SURF4O15260 269 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 EIF3GO75821 320 aaKnown RBP eCLIP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 RB1P06400 928 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 PYCR1P32322 319 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DHODHQ02127 395 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 GUCA2BQ16661 112 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 CMIPQ8IY22 773 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms