RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 NLGN4XQ8N0W4 816 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 D2HGDHQ8N465 521 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 NLGN4YQ8NFZ3 816 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF300Q96RE9 604 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 LMF2Q9BU23 707 aaKnown RBP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 ITPAQ9BY32 194 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 RAB33BQ9H082 229 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 SEC16AO15027 2179 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 PRKRAO75569 313 aaKnown RBP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 EML2O95834 649 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 ZGLP1P0C6A0 271 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 CD40LGP29965 261 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 PRKAR1BP31321 381 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 SYPL1Q16563 259 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 FCRL6Q6DN72 434 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 ADNP2Q6IQ32 1131 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 CPEB2Q7Z5Q1 589 aaKnown RBP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 VTCN1Q7Z7D3 282 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 RPS19BP1Q86WX3 136 aaKnown RBP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 PRR22Q8IZ63 422 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 DUS3LQ96G46 650 aaKnown RBP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF768Q9H5H4 540 aaKnown RBP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 RHCGQ9UBD6 479 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 SH2B3Q9UQQ2 575 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 CDH10Q9Y6N8 788 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 A0A1B0GTL3 188 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF705FA8MVS1 300 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 PRR33A8MZF0 331 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SYT5O00445 386 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ADAP00813 363 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF705DP0CH99 300 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF705BP0CI00 300 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 PTGER1P34995 402 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 RPL13AP40429 203 aaKnown RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 DMWDQ09019 674 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 VWA2Q5GFL6 755 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 RPS26P11Q5JNZ5 115 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 TMEM225Q6GV28 225 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 MAMDC2Q7Z304 686 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 CMIPQ8IY22 773 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 NRG4Q8WWG1 115 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 DDIT4LQ96D03 193 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF583Q96ND8 569 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SMURF1Q9HCE7 757 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 FSCN3Q9NQT6 498 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 NDUFAF4Q9P032 175 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 DOCK4Q8N1I0 1966 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 HSBP1L1C9JCN9 74 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 BLOC1S5-TXNDC5H3BN57 136 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 K7ESF4 209 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 STK17BO94768 372 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 MRPL19P49406 292 aaKnown RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 TBC1D25Q3MII6 688 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 VN1R4Q7Z5H5 301 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 FAM181AQ8N9Y4 354 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 OR6N1Q8NGY5 312 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 OR1L3Q8NH93 324 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 OR14L1PQ8NHC6 308 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SAP25Q8TEE9 199 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 LURAP1Q96LR2 239 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 CHST8Q9H2A9 424 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 OR51V1Q9H2C8 321 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 NANSQ9NR45 359 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SIRT5Q9NXA8 310 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 TAS2R10Q9NYW0 307 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SLAMF8Q9P0V8 285 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 TESQ9UGI8 421 aaKnown RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 IKZF2Q9UKS7 526 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 OR6C6A6NF89 314 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 TVP23AA6NH52 213 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF705EA8MWA4 302 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 B4GAT1O43505 415 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 PLOD3O60568 738 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 HK1P19367 917 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 CDKN2CP42773 168 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 RNF4P78317 190 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 PPP1R8Q12972 351 aaKnown RBP7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ZIC1Q15915 447 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 EXOC3L2Q2M3D2 409 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 RHBDD2Q6NTF9 364 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ENPP6Q6UWR7 440 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 CAMKMTQ7Z624 323 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 DNAJC22Q8N4W6 341 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 TMEM105Q8N8V8 129 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SLC38A5Q8WUX1 472 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 TFAP2CQ92754 450 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 C16orf58Q96GQ5 468 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 SLC41A3Q96GZ6 507 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 FBXL20Q96IG2 436 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 PRRC1Q96M27 445 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 MUS81Q96NY9 551 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF350Q9GZX5 532 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 FAM118AQ9NWS6 357 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 GRHPRQ9UBQ7 328 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 LTBP2Q14767 1821 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 CEP350Q5VT06 3117 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 A6NL46 340 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 J3QR89 54 aa7.92□□□□□ -1.14
SYNE1-211ENST00000413186 ACOT8O14734 319 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms