RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 DOCK10Q96BY6 2186 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 SPENQ96T58 3664 aaKnown RBP8.9□□□□□ -0.98
SMPD4-203ENST00000412570 A0A0G2JMM0 328 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 A0A1W2PNR3 127 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 A0A1W2PPB8 328 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 A0A1W2PRS3 328 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 KIR3DP1A8MWS1 328 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 ANKRD34CP0C6C1 535 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 CHMP24386 653 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 RPS27P42677 84 aaKnown RBP8.9□□□□□ -0.98
SMPD4-203ENST00000412570 ZNF136P52737 540 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 C19orf57Q0VDD7 668 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 ST3GAL3Q11203 375 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 MADCAM1Q13477 382 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 FXNQ16595 210 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 COL28A1Q2UY09 1125 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 GLYR1Q49A26 553 aaPredicted RBP8.9□□□□□ -0.98
SMPD4-203ENST00000412570 GPAT4Q86UL3 456 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 PAPD5Q8NDF8 572 aaKnown RBP8.9□□□□□ -0.98
SMPD4-203ENST00000412570 OR2Y1Q8NGV0 311 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 PLEKHA8Q96JA3 519 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 G6PC3Q9BUM1 346 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 MAGIXQ9H6Y5 334 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 MAN2C1Q9NTJ4 1040 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 TBC1D23Q9NUY8 699 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 GPR83Q9NYM4 423 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 STMN3Q9NZ72 180 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 MYOTQ9UBF9 498 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 C19orf25Q9UFG5 118 aaPredicted RBP8.9□□□□□ -0.98
SMPD4-203ENST00000412570 FBXL2Q9UKC9 423 aa8.9□□□□□ -0.98
SMPD4-203ENST00000412570 SLC35F4A4IF30 521 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 SAGE2PA6NJ88 616 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 ENO4A6NNW6 628 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 FAM166BA8MTA8 275 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 KIAA0513O60268 411 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 ZFAND5O76080 213 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 IGKV3-11P04433 115 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 HBQ1P09105 142 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 CCL3P10147 92 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 MAKP20794 623 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 ZNF385CQ66K41 422 aaPredicted RBP8.9□□□□□ -0.99
SMPD4-203ENST00000412570 PGBD2Q6P3X8 592 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 RPS19BP1Q86WX3 136 aaKnown RBP8.9□□□□□ -0.99
SMPD4-203ENST00000412570 ADIPOR1Q96A54 375 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 NR1H4Q96RI1 486 aaPredicted RBP8.9□□□□□ -0.99
SMPD4-203ENST00000412570 TNFRSF13CQ96RJ3 184 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 RASL10BQ96S79 203 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 ZNF347Q96SE7 839 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 MFRPQ9BY79 579 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 UCK2Q9BZX2 261 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 DNAJB12Q9NXW2 375 aaKnown RBP8.9□□□□□ -0.99
SMPD4-203ENST00000412570 CSAG2Q9Y5P2 127 aa8.9□□□□□ -0.99
SMPD4-203ENST00000412570 IGHV3-15A0A0B4J1V0 119 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 H3BNH8 94 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 MAGEB4O15481 346 aaPredicted RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 KLK10O43240 276 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 ZNF264O43296 627 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 CLUP10909 449 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 C21orf33P30042 268 aaPredicted RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 HLCSP50747 726 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 EEF1A1P68104 462 aaKnown RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 E2F1Q01094 437 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 TRAM2Q15035 370 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 ACSM5Q6NUN0 579 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 MRPL14Q6P1L8 145 aaKnown RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 CASP12Q6UXS9 341 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 SPATC1Q76KD6 591 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 YRDCQ86U90 279 aaKnown RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 RASSF5Q8WWW0 418 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 NMD3Q96D46 503 aaKnown RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 PRRC1Q96M27 445 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 ZNF578Q96N58 590 aaPredicted RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 FBXO8Q9NRD0 319 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 PPP4R1LQ9P1A2 415 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 IFT52Q9Y366 437 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 SMIM30A4D0T7 59 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 STMND1H3BQB6 276 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 GP1BAP07359 652 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 NGFRP08138 427 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 EVI2BP34910 448 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 ELOAQ14241 798 aaKnown RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 RSPO4Q2I0M5 234 aaPredicted RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 DEFB109BQ30KR1 87 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 HEPHL1Q6MZM0 1159 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 LYPD4Q6UWN0 246 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 CCDC71Q8IV32 467 aaPredicted RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 TSPAN14Q8NG11 270 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 OR4K13Q8NH42 304 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 PIGXQ8TBF5 258 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 TMEM239Q8WW34 195 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.89□□□□□ -0.99
SMPD4-203ENST00000412570 HPF1Q9NWY4 346 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 ERVK-18Q9QC07 812 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 KLK13Q9UKR3 277 aa8.89□□□□□ -0.99
SMPD4-203ENST00000412570 SH3PXD2BA1X283 911 aa8.88□□□□□ -0.99
SMPD4-203ENST00000412570 PPP1R3DO95685 299 aa8.88□□□□□ -0.99
SMPD4-203ENST00000412570 AGR2O95994 175 aa8.88□□□□□ -0.99
SMPD4-203ENST00000412570 WT1P19544 449 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms