RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ATP5LO75964 103 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 ZNF43P17038 809 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 GTF2E2P29084 291 aaKnown RBP4.16□□□□□ -1.74
LSM5-205ENST00000409952 FCGR2CP31995 323 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 MAP3K8P41279 467 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 NR4A2P43354 598 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 GNPDA1P46926 289 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 QARSP47897 775 aaKnown RBP4.16□□□□□ -1.74
LSM5-205ENST00000409952 UQCRFS1P47985 274 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 PEX3P56589 373 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 RAB10P61026 200 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 YWHAEP62258 255 aaKnown RBP4.16□□□□□ -1.74
LSM5-205ENST00000409952 RPS27AP62979 156 aaKnown RBP4.16□□□□□ -1.74
LSM5-205ENST00000409952 KCNJ2P63252 427 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 TMEM187Q14656 261 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 ZNF77Q15935 545 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 MRPL23Q16540 153 aaKnown RBP4.16□□□□□ -1.74
LSM5-205ENST00000409952 MS4A18Q3C1V0 323 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 DMRTC1Q5HYR2 192 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 WDR25Q64LD2 544 aaPredicted RBP4.16□□□□□ -1.74
LSM5-205ENST00000409952 ADAMTSL5Q6ZMM2 481 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 C19orf35Q6ZS72 473 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 CHMP1BQ7LBR1 199 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 CEACAM19Q7Z692 300 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 RNF130Q86XS8 419 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 C9orf106Q8NAJ2 232 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 OR4D9Q8NGE8 314 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 OR5AP2Q8NGF4 316 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 OR5T3Q8NGG3 340 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 FAM110BQ8TC76 370 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 ALKBH3Q96Q83 286 aaPredicted RBP4.16□□□□□ -1.74
LSM5-205ENST00000409952 CLCC1Q96S66 551 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 MAPKAP1Q9BPZ7 522 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 FAM173AQ9BQD7 235 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 RBM4Q9BWF3 364 aaKnown RBP4.16□□□□□ -1.74
LSM5-205ENST00000409952 HOXD1Q9GZZ0 328 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 TREM1Q9NP99 234 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 PXMP2Q9NR77 195 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 TAS2R16Q9NYV7 291 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 BFARQ9NZS9 450 aa4.16□□□□□ -1.74
LSM5-205ENST00000409952 SNED1Q8TER0 1413 aa4.15□□□□□ -1.74
LSM5-205ENST00000409952 TRBV7-9A0A0J9YWB2 115 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 ERICH2A1L162 156 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 SMCO2A6NFE2 343 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 A8MXQ7 604 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 C16orf97H3BN30 126 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 EIF3HO15372 352 aaKnown RBP eCLIP4.15□□□□□ -1.75
LSM5-205ENST00000409952 RGS16O15492 202 aaPredicted RBP4.15□□□□□ -1.75
LSM5-205ENST00000409952 CDC123O75794 336 aaPredicted RBP4.15□□□□□ -1.75
LSM5-205ENST00000409952 P04436 131 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 EIF2S2P20042 333 aaKnown RBP4.15□□□□□ -1.75
LSM5-205ENST00000409952 CALML3P27482 149 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 PRDX3P30048 256 aaKnown RBP4.15□□□□□ -1.75
LSM5-205ENST00000409952 YWHABP31946 246 aaKnown RBP4.15□□□□□ -1.75
LSM5-205ENST00000409952 RORAP35398 523 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 DCTP40126 519 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 HLCSP50747 726 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 XRCC4Q13426 336 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 LAGE3Q14657 143 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 BEX5Q5H9J7 111 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 WDR38Q5JTN6 314 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 OR8G2PQ6IF36 304 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 SASS6Q6UVJ0 657 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 STAC2Q6ZMT1 411 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 STOX1Q6ZVD7 989 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 NFE4Q86UQ8 179 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 IFNEQ86WN2 208 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 HPS6Q86YV9 775 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 MMAAQ8IVH4 418 aaKnown RBP4.15□□□□□ -1.75
LSM5-205ENST00000409952 OR4F6Q8NGB9 312 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 OR9G4Q8NGQ1 327 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 NDNFQ8TB73 568 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 LRRC20Q8TCA0 184 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 MAPK15Q8TD08 544 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 CD300LFQ8TDQ1 290 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 TBCKQ8TEA7 893 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 SMAP2Q8WU79 429 aaPredicted RBP4.15□□□□□ -1.75
LSM5-205ENST00000409952 C8orf44Q96CB5 159 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 ASB9Q96DX5 294 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 DNAJA3Q96EY1 480 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 PLEKHA8Q96JA3 519 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 IL17FQ96PD4 163 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 CNN2Q99439 309 aaKnown RBP4.15□□□□□ -1.75
LSM5-205ENST00000409952 KCNS3Q9BQ31 491 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 TMEM175Q9BSA9 504 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 RAB34Q9BZG1 259 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 GAL3ST2Q9H3Q3 398 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 NIPAL2Q9H841 368 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 IL26Q9NPH9 171 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 ESM1Q9NQ30 184 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 INPP5EQ9NRR6 644 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 PNO1Q9NRX1 252 aaKnown RBP4.15□□□□□ -1.75
LSM5-205ENST00000409952 SEC14L4Q9UDX3 406 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 LNPEPQ9UIQ6 1025 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 NUP50Q9UKX7 468 aa4.15□□□□□ -1.75
LSM5-205ENST00000409952 IGHV2-70DA0A0C4DH43 119 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 A0A1W2PR80 420 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 RNF212BA8MTL3 300 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 SERPINE3A8MV23 424 aa4.14□□□□□ -1.75
LSM5-205ENST00000409952 C11orf98E9PRG8 122 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms