RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 BRINP1O60477 761 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 REM1O75628 298 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 CBX7O95931 251 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 HOXC4P09017 264 aaPredicted RBP9.1□□□□□ -0.95
MSH2-202ENST00000406134 PSKH1P11801 424 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 EMDP50402 254 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 KIAA1024LP59773 190 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 GPM6BQ13491 265 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 HBMQ6B0K9 141 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 PRR23CQ6ZRP0 262 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 SRFBP1Q8NEF9 429 aaKnown RBP9.1□□□□□ -0.95
MSH2-202ENST00000406134 TOR1AIP2Q8NFQ8 470 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 PATE1Q8WXA2 126 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 FAM3CQ92520 227 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 TSACCQ96A04 125 aaPredicted RBP9.1□□□□□ -0.95
MSH2-202ENST00000406134 MS4A3Q96HJ5 214 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 HS6ST2Q96MM7 605 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 TEAD3Q99594 435 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 GFI1Q99684 422 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 TDRD6O60522 2096 aaKnown RBP9.1□□□□□ -0.95
MSH2-202ENST00000406134 A0A087WV48 116 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 A0A0B4J2E0 115 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.1□□□□□ -0.95
MSH2-202ENST00000406134 A0A1B0GX12 115 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 GSAPA4D1B5 854 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 SLC31A1O15431 190 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 SDHBP21912 280 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 DRD5P21918 477 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 RFX3P48380 749 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 IL18Q14116 193 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 GPR176Q14439 515 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 TIGD3Q6B0B8 471 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 DMKNQ6E0U4 476 aaPredicted RBP9.1□□□□□ -0.95
MSH2-202ENST00000406134 ZFAND1Q8TCF1 268 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 LCN9Q8WX39 176 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 DDOQ99489 341 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 PRRG3Q9BZD7 231 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 PRDM9Q9NQV7 894 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 DPP7Q9UHL4 492 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 KLHL21Q9UJP4 597 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 DTX4Q9Y2E6 619 aa9.1□□□□□ -0.95
MSH2-202ENST00000406134 ADAMTS20P59510 1910 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 A0A087WV62 115 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 SNTNA6NMZ2 147 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 HRKO00198 91 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 ARSBP15848 533 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 HK1P19367 917 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 HCCSP53701 268 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 SHC2P98077 582 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 DAB2P98082 770 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 FAPQ12884 760 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 SF3A2Q15428 464 aaKnown RBP9.09□□□□□ -0.95
MSH2-202ENST00000406134 OR4D9Q8NGE8 314 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 OR5W2Q8NH69 310 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 ART5Q96L15 291 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 ZCCHC4Q9H5U6 513 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 TRBV23OR9-2A0A075B6M9 112 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 DUXAA6NLW8 204 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 CENPXA8MT69 81 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 PRR32B1ATL7 298 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 MAGEB4O15481 346 aaPredicted RBP9.09□□□□□ -0.95
MSH2-202ENST00000406134 AKR7A2O43488 359 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 FMO6PO60774 539 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 APODP05090 189 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 MRPL3P09001 348 aaKnown RBP9.09□□□□□ -0.95
MSH2-202ENST00000406134 PVRP15151 417 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 GZMKP49863 264 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 OR12D2P58182 307 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 GPLD1P80108 840 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 GPR18Q14330 331 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 TMEM44Q2T9K0 475 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 FIGNL1Q6PIW4 674 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 RNF44Q7L0R7 432 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 OAFQ86UD1 273 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 GID4Q8IVV7 300 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 GPR135Q8IZ08 494 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 ACBD7Q8N6N7 88 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 ZSCAN1Q8NBB4 408 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 OR4N2Q8NGD1 307 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 OR5H6Q8NGV6 325 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 ZNF524Q96C55 264 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 PCNX3Q9H6A9 2034 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 DUSP22Q9NRW4 184 aa9.09□□□□□ -0.95
MSH2-202ENST00000406134 A0A0B4J203 849 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 CHST10O43529 356 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 SLC43A1O75387 559 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 SBK2P0C263 348 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 IFI30P13284 250 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 CFL1P23528 166 aaKnown RBP9.09□□□□□ -0.96
MSH2-202ENST00000406134 PBX2P40425 430 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 PSG6Q00889 435 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 CRMP1Q14194 572 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 KRT33BQ14525 404 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 PRRT3Q5FWE3 981 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 TMEM31Q5JXX7 168 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 SFXN4Q6P4A7 337 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 SEZ6L2Q6UXD5 910 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 RNF113BQ8IZP6 322 aaKnown RBP9.09□□□□□ -0.96
MSH2-202ENST00000406134 SLC22A18ASQ8N1D0 253 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 CA13Q8N1Q1 262 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms