RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TRABD2BA6NFA1 517 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 GRPRP30550 384 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 GHRHRQ02643 423 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 RBPJQ06330 500 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 SHC4Q6S5L8 630 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 OR52L2PQ8NGH6 319 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 TMEM70Q9BUB7 260 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 C20orf85Q9H1P6 137 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 SUSD2Q9UGT4 822 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 PIAS3Q9Y6X2 628 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF860A6NHJ4 632 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 IL2RGP31785 369 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 DLX1P56177 255 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 PPP1CBP62140 327 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 TOMM20LQ6UXN7 152 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 LILRB4Q8NHJ6 448 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 GABARAPL1Q9H0R8 117 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 KCNH6Q9H252 994 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 HTR5AP47898 357 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 BAK1Q16611 211 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 SBSNQ6UWP8 590 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 PCYT2Q99447 389 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 ABCC10Q5T3U5 1492 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 ADGRL3Q9HAR2 1447 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 ABCA10Q8WWZ4 1543 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 SRPX2O60687 465 aaPredicted RBP8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 ADAMTS4O75173 837 aa8.13□□□□□ -1.11
CACNA1C-220ENST00000399655 NDUFS8O00217 210 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 SYT5O00445 386 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 SYNGR2O43760 224 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 INPP4AQ96PE3 977 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 STACQ99469 402 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 CGREF1Q99674 301 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 AAMDCQ9H7C9 122 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 SIX2Q9NPC8 291 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 TCOF1Q13428 1488 aaKnown RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 M0R3E3 92 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 HAPLN1P10915 354 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 DPP4P27487 766 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 KIR2DL3P43628 341 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 PGGHGQ32M88 737 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 PAQR6Q6TCH4 344 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 C12orf57Q99622 126 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 CTRCQ99895 268 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 FAM103A1Q9BTL3 118 aaKnown RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 MED16Q9Y2X0 877 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF716A6NP11 495 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 MSCO60682 206 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 KLF7O75840 302 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 HLXQ14774 488 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 C1orf74Q96LT6 269 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 NMUR2Q9GZQ4 415 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 XYLT2Q9H1B5 865 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 LRIT1Q9P2V4 623 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 MCTS1Q9ULC4 181 aaKnown RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 FREM1Q5H8C1 2179 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 PLA2R1Q13018 1463 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 BTNL10A8MVZ5 291 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 NDST3O95803 873 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 ADRB2P07550 413 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 GRASPQ7Z6J2 395 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 CPDO75976 1380 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 TRAPPC2LH3BP13 241 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 OR4E1P0C645 316 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 DDOQ99489 341 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 SLC29A3Q9BZD2 475 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 HOXD1Q9GZZ0 328 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 MED17Q9NVC6 651 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 PCF11O94913 1555 aaKnown RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 A0A1B0GTQ1 180 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 CRHBPP24387 322 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 CD226Q15762 336 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 AADACL3Q5VUY0 350 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 TSEN2Q8NCE0 465 aaKnown RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 RTN4IP1Q8WWV3 396 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 TOP2BQ02880 1626 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 LIASO43766 372 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 TAL1P17542 331 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 SREBF1P36956 1147 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 PLA2G16P53816 162 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 GBX1Q14549 363 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 TEX26Q8N6G2 289 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF454Q8N9F8 522 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 CHST14Q8NCH0 376 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 ENPP5Q9UJA9 477 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 FZD7O75084 574 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 HAND1O96004 215 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 MAS1P04201 325 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 OR4D2P58180 307 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 DGKZQ13574 1117 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 SPATC1Q76KD6 591 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 LYSMD2Q8IV50 215 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 C2CD4CQ8TF44 421 aa8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 NKX6-2Q9C056 277 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 AGO3Q9H9G7 860 aaKnown RBP8.12□□□□□ -1.11
CACNA1C-220ENST00000399655 JTBO76095 146 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms