RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 COX20Q5RI15 118 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 ATAD3BQ5T9A4 648 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 OR5M10Q6IEU7 315 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 ZCCHC12Q6PEW1 402 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 Q71RC1 249 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-202ENST00000396828 ADGRE4PQ86SQ3 457 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 LUZP2Q86TE4 346 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 DHFR2Q86XF0 187 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 CALHM3Q86XJ0 350 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 SLC30A8Q8IWU4 369 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 PM20D2Q8IYS1 436 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 MICU2Q8IYU8 434 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 C11orf65Q8NCR3 313 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 CHDHQ8NE62 594 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-202ENST00000396828 C17orf47Q8NEP4 570 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 OR52R1Q8NGF1 315 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 MIPOL1Q8TD10 442 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 JADE3Q92613 823 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 HSPBAP1Q96EW2 488 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 LCORQ96JN0 433 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-202ENST00000396828 ALPK1Q96QP1 1244 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 OR51I1Q9H343 314 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 TMEM38AQ9H6F2 299 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 METTL7AQ9H8H3 244 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 CALHM2Q9HA72 323 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 EQTNQ9NQ60 294 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 GPATCH2Q9NW75 528 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 ACTR3BQ9P1U1 418 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 FBXL2Q9UKC9 423 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 CFL2Q9Y281 166 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 SNX13Q9Y5W8 968 aa9.35□□□□□ -0.91
NEDD8-202ENST00000396828 PCNX3Q9H6A9 2034 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 C5orf58C9J3I9 102 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 TGM6O95932 706 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 HRGP04196 525 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 ALOX5P09917 674 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 TMIGD3P0DMS9 266 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-202ENST00000396828 BMP2P12643 396 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 CPN1P15169 458 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 GGT1P19440 569 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 TMED10P49755 219 aaKnown RBP9.34□□□□□ -0.91
NEDD8-202ENST00000396828 GZMMP51124 257 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 MVDP53602 400 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 GFRA1P56159 465 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 PLCXD2Q0VAA5 305 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 ZNF155Q12901 538 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-202ENST00000396828 VEZF1Q14119 521 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 INTS11Q5TA45 600 aaKnown RBP9.34□□□□□ -0.91
NEDD8-202ENST00000396828 GLYATQ6IB77 296 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 MFSD12Q6NUT3 480 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 CDC73Q6P1J9 531 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 TNFAIP8L2Q6P589 184 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-202ENST00000396828 TMEM81Q6P7N7 255 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 NPSR1Q6W5P4 371 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 NUP54Q7Z3B4 507 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 GCNT2Q8N0V5 402 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 METTL25Q8N6Q8 603 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 CDRT4Q8N9R6 151 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 BHLHE22Q8NFJ8 381 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-202ENST00000396828 ZPLD1Q8TCW7 415 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 ADAMTS15Q8TE58 950 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 XAGE5Q8WWM1 108 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 FIG4Q92562 907 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 STMN2Q93045 179 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 POP5Q969H6 163 aaKnown RBP9.34□□□□□ -0.91
NEDD8-202ENST00000396828 TMBIM1Q969X1 311 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 INTS12Q96CB8 462 aaKnown RBP9.34□□□□□ -0.91
NEDD8-202ENST00000396828 MBD6Q96DN6 1003 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 YIPF4Q9BSR8 244 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 OSBPL11Q9BXB4 747 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 PCDHAC1Q9H158 963 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 A4GALTQ9NPC4 353 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 EXD2Q9NVH0 621 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 GIN1Q9NXP7 522 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 GALNT8Q9NY28 637 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 P2RX2Q9UBL9 471 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 PRODH2Q9UF12 536 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 EGFL7Q9UHF1 273 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 ANGPT4Q9Y264 503 aa9.34□□□□□ -0.91
NEDD8-202ENST00000396828 GPR55Q9Y2T6 319 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-202ENST00000396828 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 PRAMEF25A6NGN4 478 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 TTC36A6NLP5 189 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 CLCA1A8K7I4 914 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 HMGN4O00479 90 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 CXCR6O00574 342 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 ACOT8O14734 319 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 ARPC2O15144 300 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 SIAH2O43255 324 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 TNFRSF21O75509 655 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 RCBTB2O95199 551 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 PSMG1O95456 288 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 IL18BPO95998 194 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 ACTL6AO96019 429 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 C1QCP02747 245 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 RAF1P04049 648 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 CT45A8P0DMV1 189 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 CT45A9P0DMV2 189 aa9.33□□□□□ -0.92
NEDD8-202ENST00000396828 OR12D1P0DN82 309 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms