RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 H7C2Y5 167 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 SLC16A7O60669 478 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 SRPX2O60687 465 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 SLC43A1O75387 559 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 GPR75O95800 540 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 NCS1P62166 190 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 TRUB1Q8WWH5 349 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 PIGCQ92535 297 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF300Q96RE9 604 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 CACNG6Q9BXT2 260 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 GHRLQ9UBU3 117 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 EGFP01133 1207 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 AHRP35869 848 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 RGRP47804 291 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 RAB38P57729 211 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 VEZF1Q14119 521 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 SGPP2Q8IWX5 399 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF595Q8IYB9 648 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 RNF175Q8N4F7 328 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 DTWD1Q8N5C7 304 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 OR56B2PQ8NGI1 322 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 TREX1Q9NSU2 369 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 CNOT11Q9UKZ1 510 aaKnown RBP9.73□□□□□ -0.85
COL4A6-203ENST00000394872 CCL26Q9Y258 94 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 USP3Q9Y6I4 520 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 UBR2Q8IWV8 1755 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 A0A087WUU8 490 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 VASNQ6EMK4 673 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 TECPR1Q7Z6L1 1165 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 SERPINA11Q86U17 422 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 IL17RDQ8NFM7 739 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 BORCS7Q96B45 105 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF696Q9H7X3 374 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 FOLH1BQ9HBA9 442 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 FAIMQ9NVQ4 179 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 TMEM184BQ9Y519 407 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-203ENST00000394872 SERPINE2P07093 398 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 NR4A2P43354 598 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 RAB4BP61018 213 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 OR4K15Q8NH41 348 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 IL1F10Q8WWZ1 152 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 RAB39BQ96DA2 213 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 A0A1W2PQL4 384 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-203ENST00000394872 KDM4EB2RXH2 506 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-203ENST00000394872 DENRO43583 198 aaKnown RBP9.73□□□□□ -0.85
COL4A6-203ENST00000394872 GALR3O60755 368 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-203ENST00000394872 MT-CO2P00403 227 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 MYOGP15173 224 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF44P15621 663 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 GK3PQ14409 553 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 POC1BQ8TC44 478 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 HAVCR2Q8TDQ0 301 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 CRYGNQ8WXF5 182 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 KLHL42Q9P2K6 505 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF223Q9UK11 482 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-203ENST00000394872 LOC105369274A0A096LPK9 316 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 ARSBP15848 533 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 CPOXP36551 454 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 POU3F1Q03052 451 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-203ENST00000394872 P2RY14Q15391 338 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 MEX3BQ6ZN04 569 aaKnown RBP9.73□□□□□ -0.85
COL4A6-203ENST00000394872 OR4N4Q8N0Y3 316 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 ASB11Q8WXH4 323 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 APMAPQ9HDC9 416 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 ZFP57Q9NU63 452 aa9.73□□□□□ -0.85
COL4A6-203ENST00000394872 YKT6O15498 198 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 GYPBP06028 91 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TCN2P20062 427 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 CCL11P51671 97 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TRIM61Q5EBN2 209 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 PRAMEF20Q5VT98 475 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 ADIPOR2Q86V24 386 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 OR2A12Q8NGT7 310 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 MSANTD3Q96H12 275 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 FER1L6-AS2Q96M78 137 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 LHPPQ9H008 270 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SAP130Q9H0E3 1048 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 RLIMQ9NVW2 624 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TMEM45AQ9NWC5 275 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 ARGFXA6NJG6 315 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TRAPPC2LH3BP13 241 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SUSD5O60279 629 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 AIFM1O95831 613 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 CBX7O95931 251 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 CAV2P51636 162 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SEC61A1P61619 476 aaKnown RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 PRDX1Q06830 199 aaKnown RBP9.72□□□□□ -0.85
COL4A6-203ENST00000394872 TMEM244Q5VVB8 128 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 CST9Q5W186 159 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SYNPRQ8TBG9 265 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 OR14J1Q9UGF5 321 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 A0A1B0GTW7 788 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 SERPINA2P20848 420 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 DRD5P21918 477 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 CXCR4P61073 352 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 KEAP1Q14145 624 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 LINC00696Q6ZRV3 163 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 CCDC28AQ8IWP9 274 aa9.72□□□□□ -0.85
COL4A6-203ENST00000394872 COG8Q96MW5 612 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms