RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 COPZ1P61923 177 aa20.38■□□□□ 0.85
HMGA2-203ENST00000393578 ZFP36L1Q07352 338 aaKnown RBP20.38■□□□□ 0.85
HMGA2-203ENST00000393578 PGGHGQ32M88 737 aa20.38■□□□□ 0.85
HMGA2-203ENST00000393578 RPL13AP3Q6NVV1 102 aa20.38■□□□□ 0.85
HMGA2-203ENST00000393578 ANKRD37Q7Z713 158 aa20.38■□□□□ 0.85
HMGA2-203ENST00000393578 CYP4Z2PQ8N1L4 340 aa20.38■□□□□ 0.85
HMGA2-203ENST00000393578 AGBL5Q8NDL9 886 aa20.38■□□□□ 0.85
HMGA2-203ENST00000393578 DNAJA4Q8WW22 397 aaPredicted RBP20.38■□□□□ 0.85
HMGA2-203ENST00000393578 HSPBAP1Q96EW2 488 aa20.38■□□□□ 0.85
HMGA2-203ENST00000393578 SAMD8Q96LT4 415 aa20.38■□□□□ 0.85
HMGA2-203ENST00000393578 NRSN2Q9GZP1 204 aa20.38■□□□□ 0.85
HMGA2-203ENST00000393578 EXOSC3Q9NQT5 275 aaKnown RBP20.38■□□□□ 0.85
HMGA2-203ENST00000393578 SNTNA6NMZ2 147 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 ALOX12BO75342 701 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 REM1O75628 298 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 GABARAPO95166 117 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 HMGN1P05114 100 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 GP1BAP07359 652 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 UBL4AP11441 157 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 IL12BP29460 328 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 FOXL2P58012 376 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 PSPHP78330 225 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 ROR2Q01974 943 aaKnown RBP20.37■□□□□ 0.85
HMGA2-203ENST00000393578 NFATC3Q12968 1075 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 CTF1Q16619 201 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 DBX2Q6ZNG2 339 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 P2RY8Q86VZ1 359 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 ZNF441Q8N8Z8 693 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 FANK1Q8TC84 345 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 OR52D1Q9H346 318 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 HHATLQ9HCP6 504 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 PCDHGB2Q9Y5G2 931 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 SURF4O15260 269 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 RCBTB2O95199 551 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 LDOC1O95751 146 aaPredicted RBP20.37■□□□□ 0.85
HMGA2-203ENST00000393578 PTHP01270 115 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 CD226Q15762 336 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 TIGD6Q17RP2 521 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 TCEAL6Q6IPX3 200 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 PRR22Q8IZ63 422 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 PHOSPHO1Q8TCT1 267 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 METTL21AQ8WXB1 218 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 TCEAL3Q969E4 200 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 TMEM80Q96HE8 168 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 SEMA4CQ9C0C4 833 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 SLC26A1Q9H2B4 701 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 UBQLN3Q9H347 655 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 PCDHGA5Q9Y5G8 931 aa20.37■□□□□ 0.85
HMGA2-203ENST00000393578 CDC14CA4D256 554 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 PRODHO43272 600 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 TSPAN2O60636 221 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 RFPL3O75679 317 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 SAGP10523 405 aaPredicted RBP20.36■□□□□ 0.85
HMGA2-203ENST00000393578 AVPR2P30518 371 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 SKP2Q13309 424 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 APOOLQ6UXV4 268 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 SLC34A3Q8N130 599 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 BMPERQ8N8U9 685 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 OR52L1Q8NGH7 329 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 PLEKHA8Q96JA3 519 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 PHOX2BQ99453 314 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 IL20RAQ9UHF4 553 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 GPR52Q9Y2T5 361 aa20.36■□□□□ 0.85
HMGA2-203ENST00000393578 IGHV3-20A0A0C4DH32 117 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 SAGE2PA6NJ88 616 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 EFCAB9A8MZ26 197 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 MEN1O00255 615 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 ZNF264O43296 627 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 CPNE3O75131 537 aaKnown RBP20.35■□□□□ 0.85
HMGA2-203ENST00000393578 ICOSLGO75144 302 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 NGFRP08138 427 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 ADRA2AP08913 450 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 BMP7P18075 431 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 FUT1P19526 365 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 ACP1P24666 158 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 EMP2P54851 167 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 FXYD6P3P58550 94 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 PLCXD2Q0VAA5 305 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 RNLSQ5VYX0 342 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 HSDL2Q6YN16 418 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 ZNF367Q7RTV3 350 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 GATSQ8NAP1 163 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 ANKK1Q8NFD2 765 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 ATOH1Q92858 354 aaPredicted RBP20.35■□□□□ 0.85
HMGA2-203ENST00000393578 CTRCQ99895 268 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 SIGLEC7Q9Y286 467 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 WDR87Q6ZQQ6 2873 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 A0A087WUJ7 227 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 KDM4EB2RXH2 506 aaPredicted RBP20.35■□□□□ 0.85
HMGA2-203ENST00000393578 M0R082 166 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 GTPBP1O00178 669 aaKnown RBP20.35■□□□□ 0.85
HMGA2-203ENST00000393578 CH25HO95992 272 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 CD36P16671 472 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 TGFBR2P37173 567 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 TMEM44Q2T9K0 475 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 NFAM1Q8NET5 270 aaPredicted RBP20.35■□□□□ 0.85
HMGA2-203ENST00000393578 CCNL2Q96S94 520 aaPredicted RBP20.35■□□□□ 0.85
HMGA2-203ENST00000393578 TIMMDC1Q9NPL8 285 aa20.35■□□□□ 0.85
HMGA2-203ENST00000393578 MRPS18AQ9NVS2 196 aaKnown RBP20.35■□□□□ 0.85
HMGA2-203ENST00000393578 TAS2R16Q9NYV7 291 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms