RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 BARHL1Q9BZE3 327 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 SLC6A16Q9GZN6 736 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 DDX31Q9H8H2 851 aaKnown RBP17.65■□□□□ 0.42
CCDC50-202ENST00000392456 IL21RQ9HBE5 538 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 NLKQ9UBE8 527 aa17.65■□□□□ 0.42
CCDC50-202ENST00000392456 TCRBV16S1A1N1A0A5B0 115 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 TERTO14746 1132 aaKnown RBP17.64■□□□□ 0.42
CCDC50-202ENST00000392456 APOC3P02656 99 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 C9P02748 559 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 GIMD1P0DJR0 217 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 SSR2P43308 183 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 RGS6P49758 472 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 SMSP52788 366 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 PMS2CLQ68D20 193 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 BTN2A1Q7KYR7 527 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 WDR5BQ86VZ2 330 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 C17orf82Q86X59 251 aaPredicted RBP17.64■□□□□ 0.42
CCDC50-202ENST00000392456 MCATQ8IVS2 390 aaKnown RBP17.64■□□□□ 0.42
CCDC50-202ENST00000392456 FAM86B1Q8N7N1 296 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 OR8J3Q8NGG0 315 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 OR5K1Q8NHB7 308 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 NXPE2Q96DL1 559 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 GAREM1Q9H706 876 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 FAM60AQ9NP50 221 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 CBY1Q9Y3M2 126 aa17.64■□□□□ 0.42
CCDC50-202ENST00000392456 A0A0A6YYD5 115 aa17.64■□□□□ 0.41
CCDC50-202ENST00000392456 MITFO75030 526 aaPredicted RBP17.64■□□□□ 0.41
CCDC50-202ENST00000392456 ST6GAL1P15907 406 aa17.64■□□□□ 0.41
CCDC50-202ENST00000392456 GGT1P19440 569 aa17.64■□□□□ 0.41
CCDC50-202ENST00000392456 DCTP40126 519 aa17.64■□□□□ 0.41
CCDC50-202ENST00000392456 NUDT13Q86X67 352 aa17.64■□□□□ 0.41
CCDC50-202ENST00000392456 CPPED1Q9BRF8 314 aaPredicted RBP17.64■□□□□ 0.41
CCDC50-202ENST00000392456 FAM120CQ9NX05 1096 aaKnown RBP17.64■□□□□ 0.41
CCDC50-202ENST00000392456 FBXL2Q9UKC9 423 aa17.64■□□□□ 0.41
CCDC50-202ENST00000392456 ENTPD2Q9Y5L3 495 aa17.64■□□□□ 0.41
CCDC50-202ENST00000392456 RNF215Q9Y6U7 377 aa17.64■□□□□ 0.41
CCDC50-202ENST00000392456 TMEM131Q92545 1883 aa17.64■□□□□ 0.41
CCDC50-202ENST00000392456 AIPO00170 330 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 PDCD5O14737 125 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 DNAJB6O75190 326 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 UBXN7O94888 489 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 SPCS3P61009 180 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 HBA1P69905 142 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 GAB1Q13480 694 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 SIM2Q14190 667 aaPredicted RBP17.63■□□□□ 0.41
CCDC50-202ENST00000392456 SSPNQ14714 243 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 PLK5Q496M5 336 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 OOSP2Q86WS3 158 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 LRRC17Q8N6Y2 441 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 BAHD1Q8TBE0 780 aaPredicted RBP17.63■□□□□ 0.41
CCDC50-202ENST00000392456 PPCDCQ96CD2 204 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 CMTM3Q96MX0 182 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 MYEF2Q9P2K5 600 aaKnown RBP17.63■□□□□ 0.41
CCDC50-202ENST00000392456 PADI2Q9Y2J8 665 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 CMAHPQ9Y471 501 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 FAM221BA6H8Z2 402 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 GLOD5A6NK44 160 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 ATG12O94817 140 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 CYP4B1P13584 511 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 CERS1P27544 350 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 RPS15AP62244 130 aaKnown RBP17.63■□□□□ 0.41
CCDC50-202ENST00000392456 PPP1R8Q12972 351 aaKnown RBP17.63■□□□□ 0.41
CCDC50-202ENST00000392456 NKG7Q16617 165 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 NKAIN2Q5VXU1 208 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 OGFOD3Q6PK18 319 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 IKBIPQ70UQ0 350 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 EIF3MQ7L2H7 374 aaKnown RBP17.63■□□□□ 0.41
CCDC50-202ENST00000392456 EIF4E3Q8N5X7 224 aaKnown RBP17.63■□□□□ 0.41
CCDC50-202ENST00000392456 ACOT4Q8N9L9 421 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 OR2L5Q8NG80 312 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 HCN3Q9P1Z3 774 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 RP1P56715 2156 aa17.63■□□□□ 0.41
CCDC50-202ENST00000392456 M0R296 226 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 C6orf47O95873 294 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 LPLP06858 475 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 HIST1H1TP22492 207 aaPredicted RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 KCNJ3P48549 501 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 CASP9P55211 416 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 SERTAD2Q14140 314 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 SLC5A12Q1EHB4 618 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 MZT2BQ6NZ67 158 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 SHQ1Q6PI26 577 aaKnown RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 HSD17B13Q7Z5P4 300 aaPredicted RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ASPGQ86U10 573 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ZNF655Q8N720 491 aaPredicted RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 FBXO30Q8TB52 745 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ZNF675Q8TD23 568 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ELP5Q8TE02 316 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 TM4SF19Q96DZ7 209 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 CCDC115Q96NT0 180 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 TMEM121BQ9BXQ6 578 aaPredicted RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 FOLH1BQ9HBA9 442 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 STARD5Q9NSY2 213 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 POMT2Q9UKY4 750 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 MRPS2Q9Y399 296 aaKnown RBP17.62■□□□□ 0.41
CCDC50-202ENST00000392456 ATG4BQ9Y4P1 393 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 UNC13CQ8NB66 2214 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 A0A0J9YY10 115 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 FAM240BA0A1B0GVZ2 78 aa17.62■□□□□ 0.41
CCDC50-202ENST00000392456 H0YGG7 62 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms