RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 RPS6KB2Q9UBS0 482 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 TMEM5Q9Y2B1 443 aa18.24■□□□□ 0.51
PDLIM5-205ENST00000380180 IGHV3-20A0A0C4DH32 117 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 IDSB3KWA1 339 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 D6RAR5 112 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 NTN3O00634 580 aaPredicted RBP18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 REM1O75628 298 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 NGFRP08138 427 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 CD36P16671 472 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 TGFBR2P37173 567 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 ADH7P40394 386 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 GPR143P51810 404 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 SPCS2Q15005 226 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 CD226Q15762 336 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 PGGHGQ32M88 737 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 ZNF385CQ66K41 422 aaPredicted RBP18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 HSDL2Q6YN16 418 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 BMP8AQ7Z5Y6 402 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 OR2T33Q8NG76 320 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 BRIX1Q8TDN6 353 aaKnown RBP18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 TMEM80Q96HE8 168 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 TEX12Q9BXU0 123 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 ENKD1Q9H0I2 346 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 SCDO00767 359 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 SURF4O15260 269 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 HEXBP07686 556 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 RBM34P42696 430 aaKnown RBP18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 CLPPQ16740 277 aaPredicted RBP18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 ZNF528Q3MIS6 628 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 TCEAL6Q6IPX3 200 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 SLC29A4Q7RTT9 530 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 OVCH1Q7RTY7 1134 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 FAM71CQ8NEG0 241 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 ANKK1Q8NFD2 765 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 WDR36Q8NI36 951 aaKnown RBP18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 PHOSPHO1Q8TCT1 267 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 TCEAL3Q969E4 200 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 CTRCQ99895 268 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 MESP1Q9BRJ9 268 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 UBQLN3Q9H347 655 aa18.23■□□□□ 0.51
PDLIM5-205ENST00000380180 SYNDIG1LA6NDD5 238 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 GDF9O60383 454 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 HBQ1P09105 142 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 SAGP10523 405 aaPredicted RBP18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 TBXA2RP21731 343 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 CSTF2P33240 577 aaKnown RBP eCLIP18.22■□□□□ 0.512e-6■■□□□ 13.9
PDLIM5-205ENST00000380180 ZNF440Q8IYI8 595 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 FANK1Q8TC84 345 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 OIT3Q8WWZ8 545 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 ARRDC1-AS1Q9H2J1 176 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 SIGLEC7Q9Y286 467 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 OR6C76A6NM76 312 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 TO15178 435 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 PRODHO43272 600 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 BMP7P18075 431 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 COPZ1P61923 177 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 LSM3P62310 102 aaKnown RBP18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 ANKRD37Q7Z713 158 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 CYP4Z2PQ8N1L4 340 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 OR13C2Q8NGS9 318 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 PLEKHA8Q96JA3 519 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 OR5M11Q96RB7 305 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 BCL7BQ9BQE9 202 aa18.22■□□□□ 0.51
PDLIM5-205ENST00000380180 EXPH5Q8NEV8 1989 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 EFCAB9A8MZ26 197 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 GTPBP1O00178 669 aaKnown RBP18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 GNB5O14775 395 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 OIP5O43482 229 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 ICOSLGO75144 302 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 ONECUT2O95948 504 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 BCL10O95999 233 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 UBL4AP11441 157 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 FGF5P12034 268 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 MPLP40238 635 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 ANGPT1Q15389 498 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 MED22Q15528 200 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 LCN10Q6JVE6 187 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 CBLN3Q6UW01 205 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 OR52L1Q8NGH7 329 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 CLEC2DQ9UHP7 191 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 CARD8Q9Y2G2 431 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 A0A0C4DFX4 3053 aa18.21■□□□□ 0.51
PDLIM5-205ENST00000380180 KDM4EB2RXH2 506 aaPredicted RBP18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 TSPAN2O60636 221 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 ALOX12BO75342 701 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 PTP4A3O75365 173 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 RCBTB2O95199 551 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 SLC2A10O95528 541 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 HMGN1P05114 100 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 HSMCR30P0CW71 290 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 IL12BP29460 328 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 SKP2Q13309 424 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 ARMCX4Q5H9R4 360 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 ZNF367Q7RTV3 350 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 SLC34A3Q8N130 599 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 ZNF441Q8N8Z8 693 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 OR51A7Q8NH64 312 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 DNAJA4Q8WW22 397 aaPredicted RBP18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 TIMMDC1Q9NPL8 285 aa18.2■□□□□ 0.5
PDLIM5-205ENST00000380180 MED17Q9NVC6 651 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms