RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 CD247P20963 164 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 HTR3AP46098 478 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 SKP2Q13309 424 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 NRF1Q16656 503 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 DUSP7Q16829 419 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 RPUSD3Q6P087 351 aaKnown RBP12.63□□□□□ -0.39
UPK1A-202ENST00000379013 MYO7BQ6PIF6 2116 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 SLC22A16Q86VW1 577 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 OR2M7Q8NG81 312 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 OR5W2Q8NH69 310 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 UTP4Q969X6 686 aaKnown RBP12.63□□□□□ -0.39
UPK1A-202ENST00000379013 ZG16BQ96DA0 208 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 ARSGQ96EG1 525 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 JSRP1Q96MG2 331 aaPredicted RBP12.63□□□□□ -0.39
UPK1A-202ENST00000379013 ZNF347Q96SE7 839 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 ARHGDIGQ99819 225 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 TRIM2Q9C040 744 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 GALNT9Q9HCQ5 603 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 QPCTLQ9NXS2 382 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 DNAJB12Q9NXW2 375 aaKnown RBP12.63□□□□□ -0.39
UPK1A-202ENST00000379013 GMPR2Q9P2T1 348 aaKnown RBP12.63□□□□□ -0.39
UPK1A-202ENST00000379013 STOML1Q9UBI4 398 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 RPS6KB2Q9UBS0 482 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 KCNE5Q9UJ90 142 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 DKKL1Q9UK85 242 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 CSMD1Q96PZ7 3565 aa12.63□□□□□ -0.39
UPK1A-202ENST00000379013 TCRBV3S1A0A5B6 114 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 WIPF3A6NGB9 483 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 PEX1O43933 1283 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 FKBP6O75344 327 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 TRIM3O75382 744 aaPredicted RBP12.62□□□□□ -0.39
UPK1A-202ENST00000379013 RASAL1O95294 804 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 EIF1P41567 113 aaKnown RBP12.62□□□□□ -0.39
UPK1A-202ENST00000379013 GAS1P54826 345 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 DSCR4P56555 118 aaPredicted RBP12.62□□□□□ -0.39
UPK1A-202ENST00000379013 SMIM11AP58511 58 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 PLGLB1Q02325 96 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 ZNF117Q03924 483 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 GK3PQ14409 553 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 CD226Q15762 336 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
UPK1A-202ENST00000379013 ZNF324BQ6AW86 544 aaPredicted RBP12.62□□□□□ -0.39
UPK1A-202ENST00000379013 OLIG3Q7RTU3 272 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 GALNTL5Q7Z4T8 443 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 CARM1Q86X55 608 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 GATSQ8NAP1 163 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 ZNF563Q8TA94 476 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 DUSP19Q8WTR2 217 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 ST8SIA1Q92185 356 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 TMEM27Q9HBJ8 222 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 KLHL1Q9NR64 748 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 FLRT3Q9NZU0 649 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 AURKCQ9UQB9 309 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 CARD8Q9Y2G2 431 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
UPK1A-202ENST00000379013 TCRBV5S2A0A599 114 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 ADAMDEC1O15204 470 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 AGFG2O95081 481 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 CRYABP02511 175 aaKnown RBP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 FKBP2P26885 142 aaKnown RBP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 SLC7A1P30825 629 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 PTGDSP41222 190 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 DNASE1L1P49184 302 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 MEOX1P50221 254 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 MAP2K6P52564 334 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 CRYBA2P53672 197 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 EPS8Q12929 822 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 KPNB1Q14974 876 aaKnown RBP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 GLYR1Q49A26 553 aaPredicted RBP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 WBP2NLQ6ICG8 309 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 APOOLQ6UXV4 268 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 VTCN1Q7Z7D3 282 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 ZNF227Q86WZ6 799 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 SULF2Q8IWU5 870 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 FADS6Q8N9I5 356 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 ZFP62Q8NB50 900 aaPredicted RBP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 FAR1Q8WVX9 515 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 DNAJA4Q8WW22 397 aaPredicted RBP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 ZBTB8AQ96BR9 441 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 SH3YL1Q96HL8 342 aaPredicted RBP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 SEPHS2Q99611 448 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 IL1RAPQ9NPH3 570 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 RLIMQ9NVW2 624 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 ICAM5Q9UMF0 924 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 C15orf41Q9Y2V0 281 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 MRPS18CQ9Y3D5 142 aaKnown RBP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 SPIN1Q9Y657 262 aaPredicted RBP12.61□□□□□ -0.39
UPK1A-202ENST00000379013 V9GYQ6 96 aa12.61□□□□□ -0.39
UPK1A-202ENST00000379013 CENPVL1A0A0U1RR11 272 aa12.6□□□□□ -0.39
UPK1A-202ENST00000379013 LINC01387J3KSC0 135 aa12.6□□□□□ -0.39
UPK1A-202ENST00000379013 GNB5O14775 395 aa12.6□□□□□ -0.39
UPK1A-202ENST00000379013 HNRNPRO43390 633 aaKnown RBP12.6□□□□□ -0.39
UPK1A-202ENST00000379013 TPST1O60507 370 aa12.6□□□□□ -0.39
UPK1A-202ENST00000379013 CDC40O60508 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
UPK1A-202ENST00000379013 THRBP10828 461 aa12.6□□□□□ -0.39
UPK1A-202ENST00000379013 GP1BBP13224 206 aa12.6□□□□□ -0.39
UPK1A-202ENST00000379013 ZNF17P17021 662 aa12.6□□□□□ -0.39
UPK1A-202ENST00000379013 ZNF24P17028 368 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms