RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 TAS2R16Q9NYV7 291 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 DHDHQ9UQ10 334 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 BAIAP2Q9UQB8 552 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 SCN4AP35499 1836 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 SPTY2D1-AS1A0A0U1RR47 76 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 S100GP29377 79 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 CXCR4P61073 352 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 CD83Q01151 205 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 NLRP8Q86W28 1048 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 UEVLDQ8IX04 471 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 ABHD11Q8NFV4 315 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 NDNFQ8TB73 568 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 GGHQ92820 318 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 PGAM5Q96HS1 289 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 BMFQ96LC9 184 aa16.72■□□□□ 0.27
PTPDC1-202ENST00000375360 TRAV6A0A075B6T7 132 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 BSGP35613 385 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 PGGHGQ32M88 737 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF100Q8IYN0 542 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 CENPSQ8N2Z9 138 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 DDIT4LQ96D03 193 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 TMEM38AQ9H6F2 299 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 HCRTR1O43613 425 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 SLC16A7O60669 478 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF28P17035 718 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 TCEAL6Q6IPX3 200 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 BAHD1Q8TBE0 780 aaPredicted RBP16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 FUZQ9BT04 418 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 WSB2Q9NYS7 404 aaPredicted RBP16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 NOX1Q9Y5S8 564 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 A0A1B0GWA3 101 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 VAMP1P23763 118 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 SEC23BQ15437 767 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 SLC7A13Q8TCU3 470 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 TMEM255BQ8WV15 326 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 SPRYD4Q8WW59 207 aaPredicted RBP16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 SMURF1Q9HCE7 757 aa16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 MYEF2Q9P2K5 600 aaKnown RBP16.71■□□□□ 0.27
PTPDC1-202ENST00000375360 CLDN24A6NM45 220 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 H7C1C5 153 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 GAPDHSO14556 408 aaPredicted RBP16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 KDM4BO94953 1096 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 TACR3P29371 465 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 CBX5P45973 191 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 CCR5P51681 352 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 LCN6P62502 163 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 ACTA2P62736 377 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 ACTG2P63267 376 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 POU4F2Q12837 409 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 CBFBQ13951 182 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 GPR137CQ8N3F9 429 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 OR7G2Q8NG99 324 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 NAA11Q9BSU3 229 aaPredicted RBP16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 NT5DC2Q9H857 520 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC6A13Q9NSD5 602 aa16.71■□□□□ 0.26
PTPDC1-202ENST00000375360 SERINC4A6NH21 518 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 EEF1E1O43324 174 aaKnown RBP16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 TSPAN31Q12999 210 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 LSAMPQ13449 338 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 EIF4EBP2Q13542 120 aaPredicted RBP16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 WBP2NLQ6ICG8 309 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 THSD1Q9NS62 852 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 C2orf42Q9NWW7 574 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 CDK1P06493 297 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 CTBP2P56545 445 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 NKAIN1Q4KMZ8 207 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 MS4A15Q8N5U1 240 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 SIDT1Q9NXL6 827 aaKnown RBP16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 METTL12A8MUP2 240 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 ZNF208O43345 1280 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 PDE7AQ13946 482 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 GLT8D1Q68CQ7 371 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 ZNF517Q6ZMY9 492 aaPredicted RBP16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 GALNT6Q8NCL4 622 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 LCORQ96JN0 433 aaPredicted RBP16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 ELF4Q99607 663 aaPredicted RBP16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 KATNB1Q9BVA0 655 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 PLEKHA6Q9Y2H5 1048 aa16.7■□□□□ 0.26
PTPDC1-202ENST00000375360 STARP49675 285 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 PHC1P78364 1004 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 RASSF6Q6ZTQ3 369 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 SYT13Q7L8C5 426 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 Q8N402 240 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 CNRIP1Q96F85 164 aaPredicted RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 NTNG1Q9Y2I2 539 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 EP400Q96L91 3159 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 ICE1Q9Y2F5 2266 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 A0A1B0GVC2 190 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 A6NIN4 97 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 HMGN4O00479 90 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 ITGAMP11215 1152 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 ELAVL4P26378 380 aaKnown RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 AQP2P41181 271 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 POU3F1Q03052 451 aaPredicted RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC18B1Q6NT16 456 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 TP53I13Q8NBR0 393 aaPredicted RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 FKBP10Q96AY3 582 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 C19orf43Q9BQ61 176 aa16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 LMF2Q9BU23 707 aaKnown RBP16.69■□□□□ 0.26
PTPDC1-202ENST00000375360 SLC6A20Q9NP91 592 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms