RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PCNX3Q9H6A9 2034 aa12.47□□□□□ -0.41
SSR4-202ENST00000370085 ELOVL7A1L3X0 281 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 H0Y3Z8 333 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 H3BML4 177 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 GSTA4O15217 222 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 LRRTM2O43300 516 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 WISP2O76076 250 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 AGFG2O95081 481 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 GP1BBP13224 206 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 CPN1P15169 458 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 CALB2P22676 271 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 FKBP2P26885 142 aaKnown RBP12.46□□□□□ -0.41
SSR4-202ENST00000370085 ACVR2AP27037 513 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 AQP1P29972 269 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 RYKP34925 604 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 HTR3AP46098 478 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 SLC7A2P52569 658 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 RPS3AP61247 264 aaKnown RBP12.46□□□□□ -0.41
SSR4-202ENST00000370085 PSME3P61289 254 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 NCALDP61601 193 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 QPRTQ15274 297 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 C3AR1Q16581 482 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 NDUFAF6Q330K2 333 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 PDSS1Q5T2R2 415 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 DHRS4L2Q6PKH6 230 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 ZNF836Q6ZNA1 936 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 FGD2Q7Z6J4 655 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 HMGN2P46Q86SG4 172 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 FJX1Q86VR8 437 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 CALHM3Q86XJ0 350 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 DOLPP1Q86YN1 238 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 CHERPQ8IWX8 916 aaKnown RBP12.46□□□□□ -0.41
SSR4-202ENST00000370085 ZZZ3Q8IYH5 903 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 C10orf111Q8N326 155 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 PINK1Q9BXM7 581 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 PRDM14Q9GZV8 571 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 PNPLA3Q9NST1 481 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 PAQR5Q9NXK6 330 aaPredicted RBP12.46□□□□□ -0.41
SSR4-202ENST00000370085 DNAJB12Q9NXW2 375 aaKnown RBP12.46□□□□□ -0.41
SSR4-202ENST00000370085 ADA2Q9NZK5 511 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 HRH3Q9Y5N1 445 aa12.46□□□□□ -0.41
SSR4-202ENST00000370085 DIDO1Q9BTC0 2240 aaKnown RBP12.46□□□□□ -0.42
SSR4-202ENST00000370085 MYO7BQ6PIF6 2116 aa12.46□□□□□ -0.42
SSR4-202ENST00000370085 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 CLDN24A6NM45 220 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 FAAHO00519 579 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 PRKCAP17252 672 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 CPA2P48052 419 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 SMSP52788 366 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 PCBP3P57721 371 aaKnown RBP12.45□□□□□ -0.42
SSR4-202ENST00000370085 RAC1P63000 192 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 EEF1A1P68104 462 aaKnown RBP12.45□□□□□ -0.42
SSR4-202ENST00000370085 LIPEQ05469 1076 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 B3GNT6Q6ZMB0 384 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 TRPM8Q7Z2W7 1104 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 SLC15A3Q8IY34 581 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 MICU2Q8IYU8 434 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 PGAM4Q8N0Y7 254 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 CNOT9Q92600 299 aaKnown RBP12.45□□□□□ -0.42
SSR4-202ENST00000370085 RNF145Q96MT1 663 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 ZNF583Q96ND8 569 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 KCTD14Q9BQ13 255 aaPredicted RBP12.45□□□□□ -0.42
SSR4-202ENST00000370085 ALG2Q9H553 416 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 ACER3Q9NUN7 267 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 ARL8BQ9NVJ2 186 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 TNFRSF10DQ9UBN6 386 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 ZNF337Q9Y3M9 751 aa12.45□□□□□ -0.42
SSR4-202ENST00000370085 CCT8L1PA6NM43 557 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 B4DXG7 233 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 M0QX08 132 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 OIP5O43482 229 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 C8BP07358 591 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 APOBEC1P41238 236 aaKnown RBP12.44□□□□□ -0.42
SSR4-202ENST00000370085 IDH2P48735 452 aaKnown RBP12.44□□□□□ -0.42
SSR4-202ENST00000370085 LHX2P50458 406 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 MAP2K6P52564 334 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 SESN3P58005 492 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 B3GALT5-AS1P59052 145 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 SRYQ05066 204 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 MERTKQ12866 999 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 EPS8Q12929 822 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 FOXF1Q12946 379 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 SELENBP1Q13228 472 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 TMEM44Q2T9K0 475 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 SPATS1Q496A3 300 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 SLC25A53Q5H9E4 307 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 SAMD4BQ5PRF9 694 aaKnown RBP12.44□□□□□ -0.42
SSR4-202ENST00000370085 C1orf185Q5T7R7 199 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 C3orf33Q6P1S2 294 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 C8orf82Q6P1X6 216 aaPredicted RBP12.44□□□□□ -0.42
SSR4-202ENST00000370085 RPTNQ6XPR3 784 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 CCDC80Q76M96 950 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 GRINAQ7Z429 371 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 RANBP3LQ86VV4 465 aaPredicted RBP12.44□□□□□ -0.42
SSR4-202ENST00000370085 ULK2Q8IYT8 1036 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 FBXO27Q8NI29 283 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 ZPLD1Q8TCW7 415 aa12.44□□□□□ -0.42
SSR4-202ENST00000370085 PHF10Q8WUB8 498 aaKnown RBP12.44□□□□□ -0.42
SSR4-202ENST00000370085 SLC25A43Q8WUT9 341 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms