RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ZNF628Q5EBL2 1059 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 MZT2BQ6NZ67 158 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 HSDL2Q6YN16 418 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ZER1Q7Z7L7 766 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 FAM129CQ86XR2 697 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 NKAPQ8N5F7 415 aaKnown RBP6.37□□□□□ -1.39
CSDE1-204ENST00000369530 LRRC17Q8N6Y2 441 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 FBXO30Q8TB52 745 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 CNIH3Q8TBE1 160 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 RSC1A1Q92681 617 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 RHBDF1Q96CC6 855 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 CDK15Q96Q40 435 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 H2AFJQ9BTM1 129 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 ELOVL6Q9H5J4 265 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 MVB12BQ9H7P6 319 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 SH2D2AQ9NP31 389 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 LHX9Q9NQ69 397 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 OCIAD1Q9NX40 245 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 TUBD1Q9UJT1 453 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 MGAT4BQ9UQ53 548 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 SH2B3Q9UQQ2 575 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 CMAHPQ9Y471 501 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 NUBP2Q9Y5Y2 271 aa6.37□□□□□ -1.39
CSDE1-204ENST00000369530 H3BM21 787 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 NR5A2O00482 541 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 FFAR3O14843 346 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 INPP4BO15327 924 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 GPR42O15529 346 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PRAMEF10O60809 474 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 C1orf105O95561 183 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PRR35P0CG20 571 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 CYP4B1P13584 511 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PMELP40967 661 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 SLC1A3P43003 542 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 AGTR2P50052 363 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 MAZP56270 477 aaKnown RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PTCHD3Q3KNS1 767 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 CDNFQ49AH0 187 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 ATPAF1Q5TC12 328 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 LCN1P1Q5VSP4 162 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 BICRALQ6AI39 1079 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 ISCA2Q86U28 154 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 GKN2Q86XP6 184 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PRR18Q8N4B5 295 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 TTC29Q8NA56 475 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 OR6X1Q8NH79 312 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 GOT1L1Q8NHS2 421 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 METTL6Q8TCB7 284 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 ORAI1Q96D31 301 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 FCRL1Q96LA6 429 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 CCDC74BQ96LY2 380 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 CDCA4Q9BXL8 241 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 SLC6A20Q9NP91 592 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 MIOXQ9UGB7 285 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PTGDR2Q9Y5Y4 395 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 ASPDHA6ND91 283 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 FADS2O95864 444 aaKnown RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 UMODP07911 640 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 HIST1H2AGP0C0S8 130 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 MPC1LP0DKB6 136 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 SULT1A3P0DMM9 295 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 SULT1A4P0DMN0 295 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 HIST1H2ADP20671 130 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 C4BPBP20851 252 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 LAP3P28838 519 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 DCTP40126 519 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 OR1D5P58170 312 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 TP53BP2Q13625 1128 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 RCAN2Q14206 197 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 OR4D1Q15615 310 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 SYT16Q17RD7 645 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 SWI5Q1ZZU3 235 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 TTLL9Q3SXZ7 439 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PLA1AQ53H76 456 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PAQR7Q86WK9 346 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 SPACA3Q8IXA5 215 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 DMRTC2Q8IXT2 367 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 TMEM132CQ8N3T6 1108 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 OR2A1Q8NGT9 310 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 GPR151Q8TDV0 419 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 NAT6Q93015 286 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 MTFMTQ96DP5 389 aaKnown RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 HIST1H2AHQ96KK5 128 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 OR4K3Q96R72 315 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 COPS8Q99627 209 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 HIST1H2AJQ99878 128 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 TRMOQ9BU70 441 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 DUSP26Q9BV47 211 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 GABARAPL3Q9BY60 117 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 THUMPD1Q9NXG2 353 aaKnown RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 METTL1Q9UBP6 276 aaKnown RBP6.36□□□□□ -1.39
CSDE1-204ENST00000369530 SCP2D1Q9UJQ7 156 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PCDHB10Q9UN67 800 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 FAM186AA6NE01 2351 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 OR2AG2A6NM03 316 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 PTGES3LE9PB15 166 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 AZIN1O14977 448 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 FOXS1O43638 330 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 SH3BGRLO75368 114 aa6.36□□□□□ -1.39
CSDE1-204ENST00000369530 POP7O75817 140 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms