RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 HSPE1-MOB4S4R3N1 261 aa5.45□□□□□ -1.54
SRGAP1-201ENST00000355086 Q6ZSR6 202 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 OR4A16Q8NH70 328 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SIX2Q9NPC8 291 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 PCDHA9Q9Y5H5 950 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 OLFM2O95897 454 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 OPN1LWP04000 364 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SNRNP70P08621 437 aaKnown RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 FGF3P11487 239 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 IL20RBQ6UXL0 311 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SHISA6Q6ZSJ9 500 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 STEAP2Q8NFT2 490 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 LUZP4Q9P127 313 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 FOXE1O00358 373 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 BHLHE40O14503 412 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 OR7C1O76099 320 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 HTR5AP47898 357 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 BADQ92934 168 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 MRGPRX2Q96LB1 330 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CCDC88CQ9P219 2028 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 C17orf112F2Z3M2 114 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 GPR18Q14330 331 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 RABEPKQ7Z6M1 372 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ANKRD13BQ86YJ7 626 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ACOT11Q8WXI4 607 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ZBTB8AQ96BR9 441 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CMSS1Q9BQ75 279 aaKnown RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 HNRNPFP52597 415 aaKnown RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 HES1Q14469 280 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 MANEAQ5SRI9 462 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 IL34Q6ZMJ4 242 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ZNF551Q7Z340 670 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 DCBLD2Q96PD2 775 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CHEK1O14757 476 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SRPX2O60687 465 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 HLA-DMAP28067 261 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 GABRA4P48169 554 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 RAB35Q15286 201 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 C9orf135Q5VTT2 229 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CNIH2Q6PI25 160 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 IDO2Q6ZQW0 420 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 KANSL1Q7Z3B3 1105 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 RTP3Q9BQQ7 232 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 INIPQ9NRY2 104 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SNCGO76070 127 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CER1O95813 267 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SLC35E2BP0CK96 405 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ZNF74Q16587 644 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 M0R3H8 397 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 BET1O15155 118 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 HNRNPA1P09651 372 aaKnown RBP eCLIP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 FUT2Q10981 343 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ANKRD9Q96BM1 317 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CD300AQ9UGN4 299 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 RIMS3Q9UJD0 308 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SERPINF1P36955 418 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ZNF33BQ06732 778 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 DUSP7Q16829 419 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 TP53I3Q53FA7 332 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 OGFOD3Q6PK18 319 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 TMEM239Q8WW34 195 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 IGSF8Q969P0 613 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ITFG2Q969R8 447 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SMOXQ9NWM0 555 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 AJAP1Q9UKB5 411 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CLVS2Q5SYC1 327 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CXXC1Q9P0U4 656 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ASB4Q9Y574 426 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 PTTG1O95997 202 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 TMEM244Q5VVB8 128 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 OR4M1Q8NGD0 313 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 GNG12Q9UBI6 72 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SUOXP51687 545 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 WNT4P56705 351 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 INCA1Q0VD86 236 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 COMMD6Q7Z4G1 85 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 OR1E3Q8WZA6 343 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 RBPJLQ9UBG7 517 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ERCC6L2Q5T890 1561 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 HBG1P69891 147 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 HBG2P69892 147 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CATR1Q13166 79 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CNTNAP3Q9BZ76 1288 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ZNF436Q9C0F3 470 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 OR51J1Q9H342 316 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SLC43A1O75387 559 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 GK3PQ14409 553 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 NPY6RQ99463 290 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 GAPDHSO14556 408 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 ACVR1CQ8NER5 493 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 OR4K5Q8NGD3 323 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 PRRC1Q96M27 445 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 TCEAL7Q9BRU2 100 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 NMNAT1Q9HAN9 279 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 C5AR2Q9P296 337 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 TAS2R46P59540 309 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 PRICKLE2Q7Z3G6 844 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 SUCNR1Q9BXA5 334 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 CPNE7Q9UBL6 633 aa5.44□□□□□ -1.54
SRGAP1-201ENST00000355086 PRDX3P30048 256 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms