RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 RIMKLAQ8IXN7 391 aa14.09□□□□□ -0.15
PDGFA-201ENST00000354513 ZNF619Q8N2I2 560 aa14.09□□□□□ -0.15
PDGFA-201ENST00000354513 AGR3Q8TD06 166 aa14.09□□□□□ -0.15
PDGFA-201ENST00000354513 ZFP90Q8TF47 636 aa14.09□□□□□ -0.15
PDGFA-201ENST00000354513 OR5P2Q8WZ92 322 aa14.09□□□□□ -0.15
PDGFA-201ENST00000354513 CPNE4Q96A23 557 aaPredicted RBP14.09□□□□□ -0.15
PDGFA-201ENST00000354513 ACTRT3Q9BYD9 372 aa14.09□□□□□ -0.15
PDGFA-201ENST00000354513 SSU72Q9NP77 194 aaKnown RBP14.09□□□□□ -0.15
PDGFA-201ENST00000354513 KCNK9Q9NPC2 374 aa14.09□□□□□ -0.15
PDGFA-201ENST00000354513 KCNE5Q9UJ90 142 aa14.09□□□□□ -0.15
PDGFA-201ENST00000354513 MID2Q9UJV3 735 aa14.09□□□□□ -0.15
PDGFA-201ENST00000354513 CSPG4Q6UVK1 2322 aa14.08□□□□□ -0.15
PDGFA-201ENST00000354513 JMJD1CQ15652 2540 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 A0A1W2PNR3 127 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 HMGB1P1B2RPK0 211 aaPredicted RBP14.08□□□□□ -0.16
PDGFA-201ENST00000354513 TYROBPO43914 113 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 TMCC2O75069 709 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 PEX11AO75192 247 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 ENPP1P22413 925 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 CCT3P49368 545 aaKnown RBP14.08□□□□□ -0.16
PDGFA-201ENST00000354513 ATP12AP54707 1039 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 SUMO3P55854 103 aaPredicted RBP14.08□□□□□ -0.16
PDGFA-201ENST00000354513 ATP5J2P56134 94 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 TP53BP2Q13625 1128 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 RNPS1Q15287 305 aaKnown RBP14.08□□□□□ -0.16
PDGFA-201ENST00000354513 C6orf136Q5SQH8 315 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 PDSS1Q5T2R2 415 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 FCRLAQ7L513 359 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 STK32CQ86UX6 486 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 STEAP2Q8NFT2 490 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 KBTBD8Q8NFY9 601 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 OR5D16Q8NGK9 328 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 OR5AK3PQ8NH89 298 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 SFXN5Q8TD22 340 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 TCP10LQ8TDR4 215 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 COQ8BQ96D53 544 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 OR7D2Q96RA2 312 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 PSD2Q9BQI7 771 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 CXorf56Q9H5V9 222 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 PRSS50Q9UI38 385 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 LAMP3Q9UQV4 416 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 RNF115Q9Y4L5 304 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 SNX8Q9Y5X2 465 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 GPC6Q9Y625 555 aaPredicted RBP14.08□□□□□ -0.16
PDGFA-201ENST00000354513 CADP27708 2225 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 HIVEP2P31629 2446 aa14.08□□□□□ -0.16
PDGFA-201ENST00000354513 SMAD9O15198 467 aaKnown RBP14.07□□□□□ -0.16
PDGFA-201ENST00000354513 DNAJA2O60884 412 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 CHEK2O96017 543 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 ADAP00813 363 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 RPS4XP62701 263 aaKnown RBP14.07□□□□□ -0.16
PDGFA-201ENST00000354513 TMEM176BQ3YBM2 270 aaPredicted RBP14.07□□□□□ -0.16
PDGFA-201ENST00000354513 TMEM201Q5SNT2 666 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 ALKBH2Q6NS38 261 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 MAPK1IP1LQ8NDC0 245 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 ATP6V1C2Q8NEY4 427 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 OR56A1Q8NGH5 318 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 ZNF75CPQ92670 426 aaPredicted RBP14.07□□□□□ -0.16
PDGFA-201ENST00000354513 CHMP6Q96FZ7 201 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 PPP3R2Q96LZ3 170 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 ZNF300Q96RE9 604 aaPredicted RBP14.07□□□□□ -0.16
PDGFA-201ENST00000354513 BCO1Q9HAY6 547 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 GP6Q9HCN6 339 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 ZDHHC2Q9UIJ5 367 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 DTNAQ9Y4J8 743 aa14.07□□□□□ -0.16
PDGFA-201ENST00000354513 MAGED1Q9Y5V3 778 aaPredicted RBP14.07□□□□□ -0.16
PDGFA-201ENST00000354513 DPRXA6NFQ7 191 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 TMEM114B3SHH9 223 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 SKAP2O75563 359 aaPredicted RBP14.06□□□□□ -0.16
PDGFA-201ENST00000354513 NUDT14O95848 222 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 ATP6V1C1P21283 382 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 CDKN1AP38936 164 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 RPS26P62854 115 aaKnown RBP14.06□□□□□ -0.16
PDGFA-201ENST00000354513 HBA1P69905 142 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 PLAURQ03405 335 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 SELENBP1Q13228 472 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 SKP2Q13309 424 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 QPRTQ15274 297 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 PGGHGQ32M88 737 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 HSP90B2PQ58FF3 399 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 IL23RQ5VWK5 629 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 GTF2IRD2BQ6EKJ0 949 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 DNM1P46Q6ZS02 220 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.06□□□□□ -0.16
PDGFA-201ENST00000354513 GTF2IRD2Q86UP8 949 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 CLEC4FQ8N1N0 589 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 ADAMTS15Q8TE58 950 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 MRGPRX4Q96LA9 322 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 SDF2Q99470 211 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 TACO1Q9BSH4 297 aaKnown RBP14.06□□□□□ -0.16
PDGFA-201ENST00000354513 QRSL1Q9H0R6 528 aaKnown RBP14.06□□□□□ -0.16
PDGFA-201ENST00000354513 FANCFQ9NPI8 374 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 NPAP1Q9NZP6 1156 aa14.06□□□□□ -0.16
PDGFA-201ENST00000354513 TMEM120BA0PK00 339 aa14.05□□□□□ -0.16
PDGFA-201ENST00000354513 RNF223E7ERA6 249 aa14.05□□□□□ -0.16
PDGFA-201ENST00000354513 CLOCKO15516 846 aa14.05□□□□□ -0.16
PDGFA-201ENST00000354513 NDUFS7O75251 213 aa14.05□□□□□ -0.16
PDGFA-201ENST00000354513 BCAS1O75363 584 aaPredicted RBP14.05□□□□□ -0.16
PDGFA-201ENST00000354513 PRKD3O94806 890 aa14.05□□□□□ -0.16
PDGFA-201ENST00000354513 YES1P07947 543 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms