RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 ZNF649Q9BS31 505 aa13.55□□□□□ -0.24
SMTN-202ENST00000347557 NDC1Q9BTX1 674 aa13.55□□□□□ -0.24
SMTN-202ENST00000347557 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.55□□□□□ -0.24
SMTN-202ENST00000347557 CERS4Q9HA82 394 aa13.55□□□□□ -0.24
SMTN-202ENST00000347557 CES1P1Q9UKY3 287 aa13.55□□□□□ -0.24
SMTN-202ENST00000347557 COL4A3Q01955 1670 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 PPP1R3DO95685 299 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 NT5EP21589 574 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 NAA10P41227 235 aaPredicted RBP13.54□□□□□ -0.24
SMTN-202ENST00000347557 MRPL2Q5T653 305 aaKnown RBP13.54□□□□□ -0.24
SMTN-202ENST00000347557 NIPAL3Q6P499 406 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 RANBP3LQ86VV4 465 aaPredicted RBP13.54□□□□□ -0.24
SMTN-202ENST00000347557 CDK20Q8IZL9 346 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 OR5M3Q8NGP4 307 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 SPPL3Q8TCT6 385 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 GCDHQ92947 438 aaPredicted RBP13.54□□□□□ -0.24
SMTN-202ENST00000347557 GSDMCQ9BYG8 508 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 C11orf49Q9H6J7 331 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 MTHFD2LQ9H903 347 aaPredicted RBP13.54□□□□□ -0.24
SMTN-202ENST00000347557 BRD7Q9NPI1 651 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 TMEM74BQ9NUR3 256 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 ASB6Q9NWX5 421 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 CA5BQ9Y2D0 317 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 CACNG2Q9Y698 323 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 FAM86C2PA6NEL3 165 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 PSMD9O00233 223 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 SCO1O75880 301 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 TIMP1P01033 207 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 LINC00271P0C7V0 271 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 PEBP1P30086 187 aaKnown RBP13.54□□□□□ -0.24
SMTN-202ENST00000347557 EXOSC7Q15024 291 aaKnown RBP13.54□□□□□ -0.24
SMTN-202ENST00000347557 CST6Q15828 149 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 ZIC1Q15915 447 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 BICRALQ6AI39 1079 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 HBMQ6B0K9 141 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 TOMM5Q8N4H5 51 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 OR4D9Q8NGE8 314 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 OR2L8Q8NGY9 312 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 ABHD4Q8TB40 342 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 TMEM239Q8WW34 195 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 CCDC120Q96HB5 630 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 HS6ST2Q96MM7 605 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 C1QTNF2Q9BXJ5 285 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 KRCC1Q9NPI7 259 aaPredicted RBP13.54□□□□□ -0.24
SMTN-202ENST00000347557 ING4Q9UNL4 249 aa13.54□□□□□ -0.24
SMTN-202ENST00000347557 EXOGQ9Y2C4 368 aaKnown RBP13.54□□□□□ -0.24
SMTN-202ENST00000347557 DUXAA6NLW8 204 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 FZD7O75084 574 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 IGHA1P01876 353 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 MT-ND4P03905 459 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 MT-ND5P03915 603 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 FAM157BP0CG42 384 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 POU3F3P20264 500 aaPredicted RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 PRKAR1BP31321 381 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 FZD5Q13467 585 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 CRMP1Q14194 572 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 OR1Q1Q15612 314 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 ACSM3Q53FZ2 586 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 MRM1Q6IN84 353 aaKnown RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 MRGPREQ86SM8 312 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 LRRC28Q86X40 367 aaPredicted RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 COX18Q8N8Q8 333 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 ZNF671Q8TAW3 534 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 ZMYND19Q96E35 227 aaPredicted RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 ZNF681Q96N22 645 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 ORAI3Q9BRQ5 295 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 NIPAL2Q9H841 368 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3DA0A087WVF3 549 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3IA0A087WXS9 549 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3EA0A087X179 549 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3KA0A087X1G2 549 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 CDHR4A6H8M9 788 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3FA6NER0 549 aaPredicted RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3LB9A6J9 549 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 H3BSH0 61 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 SSNA1O43805 119 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 OR5F1O95221 314 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3HP0C7X1 549 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 DGCR2P98153 550 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3GQ6DHY5 549 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3CQ6IPX1 549 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TBC1D3Q8IZP1 549 aaPredicted RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 RFLNBQ8N5W9 214 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 SRFBP1Q8NEF9 429 aaKnown RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 OR4K14Q8NGD5 310 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 OR5J2Q8NH18 312 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 OR4C6Q8NH72 309 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 PTP4A1Q93096 173 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 MOAP1Q96BY2 351 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TEAD3Q99594 435 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 KCNJ15Q99712 375 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 SPRTNQ9H040 489 aaPredicted RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 AK6Q9Y3D8 172 aaKnown RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 SPTBP11277 2137 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 TEX13CA0A0J9YWL9 993 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 HLA-DQB1P01920 261 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 CXCL3P19876 107 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 HTR2AP28223 471 aa13.53□□□□□ -0.24
SMTN-202ENST00000347557 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
SMTN-202ENST00000347557 FOXK2Q01167 660 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms