RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 DIMT1Q9UNQ2 313 aaKnown RBP17.15■□□□□ 0.34
HOXA9-201ENST00000343483 CFL2Q9Y281 166 aa17.15■□□□□ 0.34
HOXA9-201ENST00000343483 CDH10Q9Y6N8 788 aa17.15■□□□□ 0.34
HOXA9-201ENST00000343483 A0A1B0GX78 115 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 SYNDIG1LA6NDD5 238 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 TDGF1P13385 188 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 FUT1P19526 365 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 ATP12AP54707 1039 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 C1DQ13901 141 aaKnown RBP17.14■□□□□ 0.33
HOXA9-201ENST00000343483 ANGPT1Q15389 498 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 TBC1D25Q3MII6 688 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 PLK5Q496M5 336 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 HSDL2Q6YN16 418 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 QSOX2Q6ZRP7 698 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 KANSL1Q7Z3B3 1105 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 MRGPREQ86SM8 312 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 GRAMD2AQ8IUY3 354 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 RNF113BQ8IZP6 322 aaKnown RBP17.14■□□□□ 0.33
HOXA9-201ENST00000343483 OR4Q3Q8NH05 313 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 OR4C3Q8NH37 302 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 OR4C6Q8NH72 309 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 SAP25Q8TEE9 199 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 FGF11Q92914 225 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 EFHD2Q96C19 240 aaPredicted RBP17.14■□□□□ 0.33
HOXA9-201ENST00000343483 ATP13A2Q9NQ11 1180 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 FLRT3Q9NZU0 649 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 ZNF223Q9UK11 482 aaPredicted RBP17.14■□□□□ 0.33
HOXA9-201ENST00000343483 IGKV3D-11A0A0A0MRZ8 115 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 A0A1B0GWA3 101 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 UNC119BA6NIH7 251 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 NPIPB9F8W1W9 429 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 BOLA2-SMG1P6H3BVE0 249 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 SIGLEC6O43699 453 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 HBQ1P09105 142 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 MAKP20794 623 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 TGM1P22735 817 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 SLC37A1P57057 533 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 DNASE1L3Q13609 305 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 FGFBP1Q14512 234 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 NDUFAF6Q330K2 333 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 TMEM71Q6P5X7 295 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 PLEKHG7Q6ZR37 379 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 SAMD8Q96LT4 415 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 SYNDIG1Q9H7V2 258 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 EVA1AQ9H8M9 152 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 PEX16Q9Y5Y5 336 aa17.14■□□□□ 0.33
HOXA9-201ENST00000343483 A0A0B4J2E0 115 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 A0A1B0GX12 115 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 UPK1BO75841 260 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 MSL3P1P0C860 447 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 ENDOUP21128 410 aaKnown RBP17.13■□□□□ 0.33
HOXA9-201ENST00000343483 ACAA2P42765 397 aaKnown RBP17.13■□□□□ 0.33
HOXA9-201ENST00000343483 PSMD4P55036 377 aaKnown RBP17.13■□□□□ 0.33
HOXA9-201ENST00000343483 NSDHLQ15738 373 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 KLHL22Q53GT1 634 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 ZNF574Q6ZN55 896 aaPredicted RBP17.13■□□□□ 0.33
HOXA9-201ENST00000343483 CADM2Q8N3J6 435 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 OR2T33Q8NG76 320 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 FANK1Q8TC84 345 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 SLC7A5P2Q9GIP4 190 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 ABCB10Q9NRK6 738 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 FAM86C1Q9NVL1 165 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 SIDT1Q9NXL6 827 aaKnown RBP17.13■□□□□ 0.33
HOXA9-201ENST00000343483 SEC14L4Q9UDX3 406 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 MED31Q9Y3C7 131 aa17.13■□□□□ 0.33
HOXA9-201ENST00000343483 SAGE2PA6NJ88 616 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 TTC36A6NLP5 189 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 GALR2O43603 387 aaPredicted RBP17.12■□□□□ 0.33
HOXA9-201ENST00000343483 CHP2O43745 196 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 CSTAP01040 98 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 PSMA1P25786 263 aaKnown RBP17.12■□□□□ 0.33
HOXA9-201ENST00000343483 EFNA3P52797 238 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 PRKCDQ05655 676 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 MLLT11Q13015 90 aaPredicted RBP17.12■□□□□ 0.33
HOXA9-201ENST00000343483 PGGHGQ32M88 737 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 MED25Q71SY5 747 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 CDK20Q8IZL9 346 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 OR9Q1Q8NGQ5 310 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 SLC2A12Q8TD20 617 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 BPIFA2Q96DR5 249 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 TRIM2Q9C040 744 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 POLE4Q9NR33 117 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 UNC13CQ8NB66 2214 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 LY6G6EA0A0G2JKS1 128 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 SNTNA6NMZ2 147 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 SURF4O15260 269 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 PRODHO43272 600 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 APOL3O95236 402 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 SAGP10523 405 aaPredicted RBP17.12■□□□□ 0.33
HOXA9-201ENST00000343483 RORAP35398 523 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 ETV5P41161 510 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 ETV1P50549 477 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 ZNF45Q02386 682 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.12■□□□□ 0.33
HOXA9-201ENST00000343483 ALG10BQ5I7T1 473 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 ZNF550Q7Z398 422 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 ANKK1Q8NFD2 765 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 RNFT2Q96EX2 444 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 ASPNQ9BXN1 380 aa17.12■□□□□ 0.33
HOXA9-201ENST00000343483 NUAK2Q9H093 628 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms