RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ENDOVQ8N8Q3 282 aaKnown RBP12.12□□□□□ -0.47
USP47-202ENST00000339865 ANKRD9Q96BM1 317 aaPredicted RBP12.12□□□□□ -0.47
USP47-202ENST00000339865 ZC3HAV1LQ96H79 300 aaKnown RBP12.12□□□□□ -0.47
USP47-202ENST00000339865 OR7D2Q96RA2 312 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 ARPC5LQ9BPX5 153 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 GON7Q9BXV9 100 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
USP47-202ENST00000339865 TNFRSF19Q9NS68 423 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 C1orf123Q9NWV4 160 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 CSNK1G3Q9Y6M4 447 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 A0A1W2PRU2 124 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 HTR1EP28566 365 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 VGLL4Q14135 290 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 FAM180BQ6P0A1 224 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 CNEP1R1Q8N9A8 125 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 PRRC1Q96M27 445 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 SEZ6LQ9BYH1 1024 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 DYNLRB1Q9NP97 96 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 JCADQ9P266 1359 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 SMIM28A0A1B0GU29 152 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 LAG3P18627 525 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 HLA-FP30511 346 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 MRPS10P82664 201 aaKnown RBP12.12□□□□□ -0.47
USP47-202ENST00000339865 CYB561A3Q8NBI2 242 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 HRASLS2Q9NWW9 162 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 ANKMY1Q9P2S6 941 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 ZNF816-ZNF321PA0A0X1KG74 233 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 PLSCR5A0PG75 271 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 MROH6A6NGR9 719 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 OR2B8PP59922 312 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 TAP2Q03519 686 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 TP53I3Q53FA7 332 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 GKN2Q86XP6 184 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 ZNF321PQ8N8H1 164 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 SLC7A13Q8TCU3 470 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 CREB3L4Q8TEY5 395 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 DUSP22Q9NRW4 184 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 PTGDR2Q9Y5Y4 395 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 SLC35F2Q8IXU6 374 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 C1orf87Q8N0U7 546 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 LRRC25Q8N386 305 aaPredicted RBP12.12□□□□□ -0.47
USP47-202ENST00000339865 PPP1R35Q8TAP8 253 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 OR5P2Q8WZ92 322 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 GPR22Q99680 433 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 PCNX2A6NKB5 2137 aa12.12□□□□□ -0.47
USP47-202ENST00000339865 KIAA0319Q5VV43 1072 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 OR9Q2Q8NGE9 314 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 GPR148Q8TDV2 347 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 OR14J1Q9UGF5 321 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 RASD1Q9Y272 281 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 TCRBV5S4A2TA0A5A2 114 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 C7P10643 843 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 GGT1P19440 569 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 TAS2R19P59542 299 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 CLVS2Q5SYC1 327 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 IL20RBQ6UXL0 311 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 CLEC9AQ6UXN8 241 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 C1orf127Q8N9H9 656 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 OR5B3Q8NH48 314 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 RNF141Q8WVD5 230 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 PSMF1Q92530 271 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 NXF2Q9GZY0 626 aaKnown RBP12.11□□□□□ -0.47
USP47-202ENST00000339865 TMEM72A0PK05 275 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 HIDE1A8MVS5 230 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 SMLR1H3BR10 107 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 MTHFD2P13995 350 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 JAM2P57087 298 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 PIWIL3Q7Z3Z3 882 aaKnown RBP12.11□□□□□ -0.47
USP47-202ENST00000339865 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
USP47-202ENST00000339865 C4orf36Q96KX1 117 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 OR5B2Q96R09 309 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 POMT1Q9Y6A1 747 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 CADP27708 2225 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 LOC102723971A0A1B0GUV8 181 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 FAM159BA6NKW6 160 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 H3BML4 177 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 C8AP07357 584 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 NFYAP23511 347 aaPredicted RBP12.11□□□□□ -0.47
USP47-202ENST00000339865 PSMB10P40306 273 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 CYP1B1Q16678 543 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 OR7G3Q8NG95 312 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 YIPF5Q969M3 257 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 MAGIXQ9H6Y5 334 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 IL37Q9NZH6 218 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 GJE1A6NN92 205 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 BMPR1BO00238 502 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 CDK2AP1O14519 115 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 MT-ND4LP03901 98 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 BMPR1AP36894 532 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 DAOAP59103 153 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 EOGTQ5NDL2 527 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 BTNL8Q6UX41 500 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 OR52N2Q8NGI0 321 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 ACDQ96AP0 544 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 C10orf90Q96M02 699 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 SEMA4CQ9C0C4 833 aa12.11□□□□□ -0.47
USP47-202ENST00000339865 SPEF2Q9C093 1822 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms