RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 DNAJB12Q9NXW2 375 aaKnown RBP18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 CNIH4Q9P003 139 aa18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 TESQ9UGI8 421 aaKnown RBP18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 PCDHGA5Q9Y5G8 931 aa18.67■□□□□ 0.58
RIPPLY3-201ENST00000329553 LNP1A1A4G5 178 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 POLR1CO15160 346 aaPredicted RBP18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 UPK1BO75841 260 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 LYPD3O95274 346 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 PLA2G2CQ5R387 149 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 TOR1AIP2Q8NFQ8 470 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 RHBDD1Q8TEB9 315 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 FAM46AQ96IP4 442 aaKnown RBP18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 LCORQ96JN0 433 aaPredicted RBP18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 ISPDA4D126 451 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 FGF5P12034 268 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 PTNP21246 168 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 GSTM3P21266 225 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 ACAA2P42765 397 aaKnown RBP18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 RGS6P49758 472 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 SLX4IPQ5VYV7 408 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 LCN10Q6JVE6 187 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 WDR88Q6ZMY6 472 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 MBOAT2Q6ZWT7 520 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 OVCH1Q7RTY7 1134 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 SLC22A16Q86VW1 577 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 KIF18BQ86Y91 864 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 NRMQ8IXM6 262 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 C9orf40Q8IXQ3 194 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 OR1N1Q8NGS0 311 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 PIGXQ8TBF5 258 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 ART5Q96L15 291 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 GAL3ST4Q96RP7 486 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 PHOX2BQ99453 314 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 MESP1Q9BRJ9 268 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 CDADC1Q9BWV3 514 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 FLRT3Q9NZU0 649 aa18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 CCDC59Q9P031 241 aaKnown RBP18.66■□□□□ 0.58
RIPPLY3-201ENST00000329553 IGHV3-20A0A0C4DH32 117 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 C2orf92A0A1B0GVN3 265 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 PIP5K1CO60331 668 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 ONECUT2O95948 504 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 HBQ1P09105 142 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 ACP1P24666 158 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 PSMD4P55036 377 aaKnown RBP18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 CDC20Q12834 499 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 TSPAN31Q12999 210 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 TRA2AQ13595 282 aaKnown RBP eCLIP18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 EBPQ15125 230 aaKnown RBP18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 ARMCX4Q5H9R4 360 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 LYSMD2Q8IV50 215 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 BMPERQ8N8U9 685 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 B3GNT7Q8NFL0 401 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 KBTBD8Q8NFY9 601 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 ZNF559Q9BR84 538 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 CDCA4Q9BXL8 241 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 NRSN2Q9GZP1 204 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 EVA1AQ9H8M9 152 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 UGT2A1Q9Y4X1 527 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 PCDHGB2Q9Y5G2 931 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 GPR179Q6PRD1 2367 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 SH3D21A4FU49 640 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 FRG2CA6NGY1 282 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 IDSB3KWA1 339 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 IL33O95760 270 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 IL11RAQ14626 422 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 C12orf73Q69YU5 71 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 PTCHD4Q6ZW05 846 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 ZNF367Q7RTV3 350 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 BPHLQ86WA6 291 aaPredicted RBP18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 IQCF1Q8N6M8 205 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 AGBL5Q8NDL9 886 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 C9orf43Q8TAL5 461 aaPredicted RBP18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 OR51E2Q9H255 320 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 SP140LQ9H930 580 aa18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 AKIRIN1Q9H9L7 192 aaPredicted RBP18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 CNOT2Q9NZN8 540 aaKnown RBP18.65■□□□□ 0.58
RIPPLY3-201ENST00000329553 TTC28Q96AY4 2481 aa18.64■□□□□ 0.58
RIPPLY3-201ENST00000329553 SERINC4A6NH21 518 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 SAGE2PA6NJ88 616 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 HEXBP07686 556 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 ZNF181Q2M3W8 571 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 KLHL26Q53HC5 615 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 PLA2G12AQ9BZM1 189 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 EGLN3Q9H6Z9 239 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 TMEM27Q9HBJ8 222 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 POLE4Q9NR33 117 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 COL5A1P20908 1838 aaPredicted RBP18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 CDC14CA4D256 554 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 EFCAB10A6NFE3 127 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 VSTM2BA6NLU5 285 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 MEN1O00255 615 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 MPZL2O60487 215 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 CNOT3O75175 753 aaKnown RBP18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 GP1BAP07359 652 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 DBTP11182 482 aaKnown RBP18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 CCL4P13236 92 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 GPR4P46093 362 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 GIPRP48546 466 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 GPR143P51810 404 aa18.64■□□□□ 0.57
RIPPLY3-201ENST00000329553 NDUFAF6Q330K2 333 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms