RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 FIBINQ8TAL6 211 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 PTP4A1Q93096 173 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 ZNF707Q96C28 371 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-202ENST00000318266 OR14A2Q96R54 314 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 OR52D1Q9H346 318 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 LDAHQ9H6V9 325 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 NOX3Q9HBY0 568 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 HMX1Q9NP08 348 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-202ENST00000318266 IL20Q9NYY1 176 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 PPIL1Q9Y3C6 166 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 SPTBP11277 2137 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 H3BSH0 61 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 PSMD9O00233 223 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 FLRT2O43155 660 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 RP2O75695 350 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 IGF2P01344 180 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 ZGLP1P0C6A0 271 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 EPXP11678 715 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 UGT2B7P16662 529 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 DCTDP32321 178 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 METAP1P53582 386 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 TGM3Q08188 693 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 GDF7Q7Z4P5 450 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 TMEM25Q86YD3 366 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 ASB12Q8WXK4 309 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 PDCD1LG2Q9BQ51 273 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 WASH6PQ9NQA3 447 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 HPF1Q9NWY4 346 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 IRAK3Q9Y616 596 aa8.97□□□□□ -0.97
PTPRA-202ENST00000318266 OR6C74A6NCV1 312 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 GNA13Q14344 377 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 LINC00303Q3SY05 128 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 MEPCEQ7L2J0 689 aaKnown RBP8.96□□□□□ -0.97
PTPRA-202ENST00000318266 NUDT13Q86X67 352 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 BVESQ8NE79 360 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 OR51A7Q8NH64 312 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 PFN4Q8NHR9 129 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 FANK1Q8TC84 345 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 SMIM4Q8WVI0 70 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 ACOT11Q8WXI4 607 aaPredicted RBP8.96□□□□□ -0.97
PTPRA-202ENST00000318266 UBE2E3Q969T4 207 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 ZNF689Q96CS4 500 aaPredicted RBP8.96□□□□□ -0.97
PTPRA-202ENST00000318266 SLC41A3Q96GZ6 507 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 PEX11GQ96HA9 241 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 NPAS1Q99742 590 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 DPYSL5Q9BPU6 564 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 IFT27Q9BW83 186 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 MS4A8Q9BY19 250 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 ACTR6Q9GZN1 396 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 PCDHGA5Q9Y5G8 931 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 NPTNQ9Y639 398 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 VCANP13611 3396 aa8.96□□□□□ -0.97
PTPRA-202ENST00000318266 ANKRD61A6NGH8 418 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 A8MXK9 166 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 POP7O75817 140 aaKnown RBP8.96□□□□□ -0.98
PTPRA-202ENST00000318266 EGFP01133 1207 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 RLN1P04808 185 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 TIMP2P16035 220 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 C4BPBP20851 252 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 FPR3P25089 353 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 S100A11P31949 105 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 PLA2G5P39877 138 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 ADH7P40394 386 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 MC3RP41968 323 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 CTAG1AP78358 180 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF169Q14929 603 aaPredicted RBP8.96□□□□□ -0.98
PTPRA-202ENST00000318266 RPE65Q16518 533 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 C2orf68Q2NKX9 166 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 FAM26DQ5JW98 314 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 SPOUT1Q5T280 376 aaKnown RBP8.96□□□□□ -0.98
PTPRA-202ENST00000318266 METTL11BQ5VVY1 283 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 ELP2Q6IA86 826 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 HEPHL1Q6MZM0 1159 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 OVCH2Q7RTZ1 564 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 PAQR7Q86WK9 346 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 HDDC3Q8N4P3 179 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 COL26A1Q96A83 441 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 TIFAQ96CG3 184 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 WDR34Q96EX3 536 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 SYNDIG1Q9H7V2 258 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 FKRPQ9H9S5 495 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 SLC35C2Q9NQQ7 365 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 PRDM9Q9NQV7 894 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 C20orf141Q9NUB4 165 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 MRTO4Q9UKD2 239 aaKnown RBP8.96□□□□□ -0.98
PTPRA-202ENST00000318266 HS3ST2Q9Y278 367 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 PCDHGA9Q9Y5G4 932 aaKnown RBP8.96□□□□□ -0.98
PTPRA-202ENST00000318266 PCYT1BQ9Y5K3 369 aaPredicted RBP8.96□□□□□ -0.98
PTPRA-202ENST00000318266 RNF215Q9Y6U7 377 aa8.96□□□□□ -0.98
PTPRA-202ENST00000318266 KPNA3O00505 521 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 NDUFS4O43181 175 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 GKN3PP0CG01 181 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 TEAD1P28347 426 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 NTSP30990 170 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 PSMB10P40306 273 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 NAA10P41227 235 aaPredicted RBP8.95□□□□□ -0.98
PTPRA-202ENST00000318266 CAP1Q01518 475 aa8.95□□□□□ -0.98
PTPRA-202ENST00000318266 HYAL4Q2M3T9 481 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms