RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ENDOUP21128 410 aaKnown RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 MPLP40238 635 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 VEGFCP49767 419 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 GPR143P51810 404 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CLDN8P56748 225 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 UBE2KP61086 200 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 PLGLB1Q02325 96 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 TAP2Q03519 686 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 RBPJQ06330 500 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 FOXC1Q12948 553 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 STK11Q15831 433 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 PXDC1Q5TGL8 231 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CARD17Q5XLA6 110 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 FCRLBQ6BAA4 426 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 IDO2Q6ZQW0 420 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 Q6ZVL8 140 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 NRROSQ86YC3 692 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ZNF695Q8IW36 515 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 DNAAF1Q8NEP3 725 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 GLYATL1Q969I3 302 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 HS6ST2Q96MM7 605 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 APOOQ9BUR5 198 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 METTL7AQ9H8H3 244 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 PCDHGA5Q9Y5G8 931 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 TRPM7Q96QT4 1865 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 HCRTR2O43614 444 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 JRKO75564 520 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CRHBPP24387 322 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CCR5P51681 352 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 UGT3A2Q3SY77 523 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 TP53I3Q53FA7 332 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ZNF691Q5VV52 312 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CGB2Q6NT52 195 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 LEG1Q6P5S2 330 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 DPY19L4Q7Z388 723 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 APCDD1Q8J025 514 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CCDC71LQ8N9Z2 235 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 BRIX1Q8TDN6 353 aaKnown RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 ACOT11Q8WXI4 607 aaPredicted RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 IGSF8Q969P0 613 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 FCRL1Q96LA6 429 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 FIZ1Q96SL8 496 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 INPP5KQ9BT40 448 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 TXLNGYQ9BZA5 131 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 SLC25A18Q9H1K4 315 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ATXN7L1Q9ULK2 861 aaPredicted RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 SMLR1H3BR10 107 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CTDSP2O14595 271 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 EMC8O43402 210 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CSTAP01040 98 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 HRGP04196 525 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 GGT2P36268 569 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CSNK1EP49674 416 aaKnown RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 IL13RA1P78552 427 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ZXDBP98169 803 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ZNF33BQ06732 778 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 RSU1Q15404 277 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 HYAL4Q2M3T9 481 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 PLEKHS1Q5SXH7 462 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 METTL2BQ6P1Q9 378 aaKnown RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 SLC22A25Q6T423 547 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 C14orf80Q86SX3 495 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 SLC35F2Q8IXU6 374 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ENTHD1Q8IYW4 607 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 CELF2-AS1Q8N7Q2 184 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 IL17RDQ8NFM7 739 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 OR4K5Q8NGD3 323 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 OR10K1Q8NGX5 313 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 TOMM40LQ969M1 308 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 NIT2Q9NQR4 276 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 PIGBOS1A0A0B4J2F0 54 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 A0A0D9SEW6 157 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 VSTM5A8MXK1 200 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 PHYHO14832 338 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ITGB8P26012 769 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 POU3F4P49335 361 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 POLR2HP52434 150 aaKnown RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 RRADP55042 308 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 GALK2Q01415 458 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 HHEXQ03014 270 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 EIF2B1Q14232 305 aaKnown RBP7.69□□□□□ -1.18
VPS41-202ENST00000310301 TMEM41BQ5BJD5 291 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 PAGE3Q5JUK9 113 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 HACD4Q5VWC8 232 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 TMEM225Q6GV28 225 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 KCNIP4Q6PIL6 250 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 HORMAD2Q8N7B1 307 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 ST8SIA2Q92186 375 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 LOXL4Q96JB6 756 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 TMEM98Q9Y2Y6 226 aa7.69□□□□□ -1.18
VPS41-202ENST00000310301 PUS1Q9Y606 427 aaKnown RBP eCLIP7.69□□□□□ -1.18
VPS41-202ENST00000310301 H7BY64 318 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 FABP7O15540 132 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 S1PR4O95977 384 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 ITGAMP11215 1152 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 BPIP17213 487 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 HOXD13P35453 343 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms