RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 DUSP22Q9NRW4 184 aa5.66□□□□□ -1.5
ITGB1-201ENST00000302278 TANC2Q9HCD6 1990 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 EIF4E2O60573 245 aaKnown RBP5.65□□□□□ -1.5
ITGB1-201ENST00000302278 LYZL6O75951 148 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 PMS2P2O95744 297 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 HSD17B3P37058 310 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 SERPINB4P48594 390 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 ALDH9A1P49189 494 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 NCBP2P52298 156 aaKnown RBP eCLIP5.65□□□□□ -1.52e-8■■■■■ 39
ITGB1-201ENST00000302278 NAA20P61599 178 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 H3F3AP84243 136 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 STX5Q13190 355 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 GALNT5Q7Z7M9 940 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 PLD6Q8N2A8 252 aaKnown RBP5.65□□□□□ -1.5
ITGB1-201ENST00000302278 SLC35F6Q8N357 371 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 TEX29Q8N6K0 151 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 ZNF527Q8NB42 609 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 FAM71CQ8NEG0 241 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 CEP70Q8NHQ1 597 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 NEU4Q8WWR8 484 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-201ENST00000302278 APIPQ96GX9 242 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 ZNF317Q96PQ6 595 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-201ENST00000302278 ERP44Q9BS26 406 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 FKRPQ9H9S5 495 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 ACSS1Q9NUB1 689 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-201ENST00000302278 EMC3Q9P0I2 261 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 TMEFF2Q9UIK5 374 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-201ENST00000302278 CCL27Q9Y4X3 112 aa5.65□□□□□ -1.5
ITGB1-201ENST00000302278 B9A039 149 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 NME6O75414 186 aaPredicted RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 H6PDO95479 791 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 KRT6AP02538 564 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 KRT6BP04259 564 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 IGFBP1P08833 259 aaPredicted RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 TCEA1P23193 301 aaKnown RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 KRT6CP48668 564 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 CLK1P49759 484 aaKnown RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 PKNOX1P55347 436 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 FAM180BQ6P0A1 224 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 MTDHQ86UE4 582 aaKnown RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 GAS2L3Q86XJ1 694 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 FBXO27Q8NI29 283 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ST8SIA1Q92185 356 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ZNF524Q96C55 264 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 REXO5Q96IC2 774 aaKnown RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ZNF300Q96RE9 604 aaPredicted RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ZNF442Q9H7R0 627 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 A8MT66 165 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 LILRA1O75019 489 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 SMIM24O75264 130 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 RSL1D1O76021 490 aaKnown RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 FSHBP01225 129 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 IGLV1-44P01699 117 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ENPP1P22413 925 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 GABRA3P34903 492 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 SLC25A3Q00325 362 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 RASGEF1BQ0VAM2 473 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ZNF678Q5SXM1 525 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 C3orf33Q6P1S2 294 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ZDHHC24Q6UX98 284 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ZAR1Q86SH2 424 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ZNF619Q8N2I2 560 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 ZNF786Q8N393 782 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 SLC25A43Q8WUT9 341 aaPredicted RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 BTBD2Q9BX70 525 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 NMUR2Q9GZQ4 415 aa5.65□□□□□ -1.51
ITGB1-201ENST00000302278 CPSF2Q9P2I0 782 aaKnown RBP5.65□□□□□ -1.51
ITGB1-201ENST00000302278 CHN1P15882 459 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 NTSP30990 170 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 KIAA0040Q15053 153 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 UNC50Q53HI1 259 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 NUP43Q8NFH3 380 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 BBS4Q96RK4 519 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 MRPL46Q9H2W6 279 aaKnown RBP5.64□□□□□ -1.51
ITGB1-201ENST00000302278 ZMAT3Q9HA38 289 aaKnown RBP5.64□□□□□ -1.51
ITGB1-201ENST00000302278 ZNF180Q9UJW8 692 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 PRR14LQ5THK1 2151 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 PPP6CO00743 305 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 IDH3GP51553 393 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-201ENST00000302278 MRPS11P82912 194 aaKnown RBP5.64□□□□□ -1.51
ITGB1-201ENST00000302278 CLCQ05315 142 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 SLC22A25Q6T423 547 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 ZNF572Q7Z3I7 529 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-201ENST00000302278 PPM1NQ8N819 430 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 FBXO25Q8TCJ0 367 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 PIK3R3Q92569 461 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 MTERF3Q96E29 417 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 TRMOQ9BU70 441 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 BPESC1Q9GZL8 116 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 ACSS3Q9H6R3 686 aa5.64□□□□□ -1.51
ITGB1-201ENST00000302278 DDX18Q9NVP1 670 aaKnown RBP5.64□□□□□ -1.51
ITGB1-201ENST00000302278 UQCRHLA0A096LP55 91 aa5.63□□□□□ -1.51
ITGB1-201ENST00000302278 SCDO00767 359 aa5.63□□□□□ -1.51
ITGB1-201ENST00000302278 OR4F21O95013 312 aa5.63□□□□□ -1.51
ITGB1-201ENST00000302278 TGFAP01135 160 aa5.63□□□□□ -1.51
ITGB1-201ENST00000302278 HOXB1P14653 301 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-201ENST00000302278 NTF4P34130 210 aa5.63□□□□□ -1.51
ITGB1-201ENST00000302278 EVX1P49640 407 aa5.63□□□□□ -1.51
ITGB1-201ENST00000302278 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.63□□□□□ -1.51
ITGB1-201ENST00000302278 CNPY4Q8N129 248 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms