RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 TMEM239Q8WW34 195 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 HOXD1Q9GZZ0 328 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 SLC6A15Q9H2J7 730 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 TTLL8A6PVC2 850 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 RHPN2P1A8MT19 583 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 TXNL1O43396 289 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 INHBBP09529 407 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 GKN3PP0CG01 181 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 FPR3P25089 353 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 DUSP5Q16690 384 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 KIAA0895LQ68EN5 471 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 FBXO42Q6P3S6 717 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 RTL4Q6ZR62 310 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 ZNF550Q7Z398 422 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 GDF7Q7Z4P5 450 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 VN1R4Q7Z5H5 301 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 NANOGP1Q8N7R0 232 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 DPH1Q9BZG8 443 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 RNF167Q9H6Y7 350 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 MRPS17Q9Y2R5 130 aaKnown RBP15.16■□□□□ 0.02
CTCF-201ENST00000264010 CDH23Q9H251 3354 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 NPIPA5A0A0B4J1W7 369 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 NPIPA7E9PJI5 369 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 L7N2F9 121 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 POLR1CO15160 346 aaPredicted RBP15.16■□□□□ 0.02
CTCF-201ENST00000264010 AKR7A2O43488 359 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 NPIPA8P0DM63 369 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 DNASE1P24855 282 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 LIMS1P48059 325 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 MANEAQ5SRI9 462 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 USP53Q70EK8 1073 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 CPOQ8IVL8 374 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 PARP16Q8N5Y8 322 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 OR4D11Q8NGI4 311 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 CCDC32Q9BV29 185 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 MMP17Q9ULZ9 603 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 C19orf53Q9UNZ5 99 aaPredicted RBP15.16■□□□□ 0.02
CTCF-201ENST00000264010 CSNK1G3Q9Y6M4 447 aa15.16■□□□□ 0.02
CTCF-201ENST00000264010 GPLD1P80108 840 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 RUNX2Q13950 521 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 AMZ1Q400G9 498 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 DGLUCYQ7Z3D6 616 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 ACBD7Q8N6N7 88 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 OR51A7Q8NH64 312 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 UBQLN2Q9UHD9 624 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 MRTO4Q9UKD2 239 aaKnown RBP15.15■□□□□ 0.02
CTCF-201ENST00000264010 SLC22A7Q9Y694 548 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 DNAH14Q0VDD8 3507 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 SLC6A6P31641 620 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 ARHGAP11BQ3KRB8 267 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 PYHIN1Q6K0P9 492 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 LYPD8Q6UX82 237 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 ZNF767PQ75MW2 155 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 LSMEM1Q8N8F7 131 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 ZFP41Q8N8Y5 198 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 ZBTB44Q8NCP5 570 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 ATP6V1C2Q8NEY4 427 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 SLC37A2Q8TED4 501 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 PATE1Q8WXA2 126 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 BMFQ96LC9 184 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 MAU2Q9Y6X3 613 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 H3BQ06 376 aaPredicted RBP15.15■□□□□ 0.02
CTCF-201ENST00000264010 CDC123O75794 336 aaPredicted RBP15.15■□□□□ 0.02
CTCF-201ENST00000264010 TBX6O95947 436 aaPredicted RBP15.15■□□□□ 0.02
CTCF-201ENST00000264010 ALAS2P22557 587 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 ACVR2AP27037 513 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 NUDT1P36639 197 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 HTR4Q13639 388 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 TRMT12Q53H54 448 aaKnown RBP15.15■□□□□ 0.02
CTCF-201ENST00000264010 CCDC157Q569K6 752 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 MRPL2Q5T653 305 aaKnown RBP15.15■□□□□ 0.02
CTCF-201ENST00000264010 ELP2Q6IA86 826 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 OAFQ86UD1 273 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 MCATQ8IVS2 390 aaKnown RBP15.15■□□□□ 0.02
CTCF-201ENST00000264010 NKAIN4Q8IVV8 208 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 OR2A14Q96R47 310 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 MENTQ9BUN1 341 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 TRIM36Q9NQ86 728 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 MED17Q9NVC6 651 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 EVA1BQ9NVM1 165 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 LTBP2Q14767 1821 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
CTCF-201ENST00000264010 LOC105369274A0A096LPK9 316 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 LOC102723532A0A0G2JNH3 316 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 HK1P19367 917 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 PEBP1P30086 187 aaKnown RBP15.14■□□□□ 0.01
CTCF-201ENST00000264010 OR1Q1Q15612 314 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 ESCO2Q56NI9 601 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 PLBD1Q6P4A8 553 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 GPR135Q8IZ08 494 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 SPAG16Q8N0X2 631 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 OR4N4Q8N0Y3 316 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 CEP76Q8TAP6 659 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 MMABQ96EY8 250 aaPredicted RBP15.14■□□□□ 0.01
CTCF-201ENST00000264010 SDF2Q99470 211 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 ARHGDIGQ99819 225 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 SLC25A19Q9HC21 320 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 OBSL1O75147 1896 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 A0A1W2PQF6 199 aa15.14■□□□□ 0.01
CTCF-201ENST00000264010 TMEM150CB9EJG8 249 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms