RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 RDH16O75452 317 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 STK17BO94768 372 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 LCATP04180 440 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 JUNDP17535 347 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 NME2P22392 152 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 VEGFCP49767 419 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 INHBCP55103 352 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 CLDN6P56747 220 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 SOWAHCQ53LP3 525 aaPredicted RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 TRNP1Q6NT89 227 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 CBLL1Q75N03 491 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 OR13C2Q8NGS9 318 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 FOXRED1Q96CU9 486 aaPredicted RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 HHIPQ96QV1 700 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 SYT11Q9BT88 431 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 ANTXRLA6NF34 631 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 CA12O43570 354 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 LCMT2O60294 686 aaKnown RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 DBHP09172 617 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 XCR1P46094 333 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 RAB40BQ12829 278 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 AAK1Q2M2I8 961 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 AGAP7PQ5VUJ5 663 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 KIAA0319Q5VV43 1072 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 KANSL1Q7Z3B3 1105 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 MRPL41Q8IXM3 137 aaKnown RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 OR1J4Q8NGS1 313 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 OR2A12Q8NGT7 310 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 GPR148Q8TDV2 347 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 OR5B2Q96R09 309 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 C20orf24Q9BUV8 137 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 PARP12Q9H0J9 701 aaKnown RBP11.32□□□□□ -0.6
SMG6-201ENST00000263073 TREX1Q9NSU2 369 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 CLEC2DQ9UHP7 191 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 ASB4Q9Y574 426 aa11.32□□□□□ -0.6
SMG6-201ENST00000263073 VEGFDO43915 354 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 CSO75390 466 aaKnown RBP11.31□□□□□ -0.6
SMG6-201ENST00000263073 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 CTSCP53634 463 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 CLDN2P57739 230 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 SEC61A1P61619 476 aaKnown RBP11.31□□□□□ -0.6
SMG6-201ENST00000263073 TNK1Q13470 666 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 OPCMLQ14982 345 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 EBPQ15125 230 aaKnown RBP11.31□□□□□ -0.6
SMG6-201ENST00000263073 SLC5A12Q1EHB4 618 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 FRMPD2BQ6IN97 320 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 ALOXE3Q9BYJ1 711 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 C19orf25Q9UFG5 118 aaPredicted RBP11.31□□□□□ -0.6
SMG6-201ENST00000263073 PGAP2Q9UHJ9 254 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 RD3LP0DJH9 198 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 CD6P30203 668 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 DHCR24Q15392 516 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 ADPRMQ3LIE5 342 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 DCST2Q5T1A1 773 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 FAM69AQ5T7M9 428 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 PRSS45Q7RTY3 260 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 ZNF100Q8IYN0 542 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 SFXN5Q8TD22 340 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 MS4A4EQ96PG1 132 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 TGIF2Q9GZN2 237 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 ZMAT3Q9HA38 289 aaKnown RBP11.31□□□□□ -0.6
SMG6-201ENST00000263073 PEX12O00623 359 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 B4GALT3O60512 393 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 RAB3AP20336 220 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 TMEM35AQ53FP2 167 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 YIF1BQ5BJH7 314 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 HIST2H3PS2Q5TEC6 136 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 FOXB2Q5VYV0 432 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 OR7E24Q6IFN5 339 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 MEPCEQ7L2J0 689 aaKnown RBP11.31□□□□□ -0.6
SMG6-201ENST00000263073 UEVLDQ8IX04 471 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 DNAJC22Q8N4W6 341 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 OR51Q1Q8NH59 317 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 FNDC9Q8TBE3 224 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 RTP3Q9BQQ7 232 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 MAF1Q9H063 256 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 PDE7BQ9NP56 450 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 IFNA10P01566 189 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 SYPP08247 313 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 MAGEB1P43366 347 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 TCTE1Q5JU00 501 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 BORAQ6PGQ7 559 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 GPR137CQ8N3F9 429 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 OR52R1Q8NGF1 315 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 TEX37Q96LM6 180 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 OR7D2Q96RA2 312 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 NIPSNAP1Q9BPW8 284 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 ZNF160Q9HCG1 818 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 NCDNQ9UBB6 729 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 SCO1O75880 301 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 SNAPINO95295 136 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 TP53P04637 393 aaPredicted RBP11.31□□□□□ -0.6
SMG6-201ENST00000263073 PRKAR1BP31321 381 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 KIAA1024LP59773 190 aa11.31□□□□□ -0.6
SMG6-201ENST00000263073 TMPPEQ6ZT21 453 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms