RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PCDHB14Q9Y5E9 798 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 TRGV8A0A0C4DH27 118 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 CLEC18AA5D8T8 446 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 AQP7O14520 342 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 PFDN1O60925 122 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 SEMA7AO75326 666 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 ANGPTL1O95841 491 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 CAPGP40121 348 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 ANXA11P50995 505 aaKnown RBP15.25■□□□□ 0.03
SDCBP-201ENST00000260130 CASP6P55212 293 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 LIPEQ05469 1076 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 C17orf67Q0P5P2 114 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 GTDC1Q4AE62 458 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 C1QL3Q5VWW1 255 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 CLEC18BQ6UXF7 455 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 C16orf62Q7Z3J2 963 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 FAM26EQ8N5C1 309 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 CLEC18CQ8NCF0 446 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 PNPT1Q8TCS8 783 aaKnown RBP15.25■□□□□ 0.03
SDCBP-201ENST00000260130 ISOC1Q96CN7 298 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 YTHDF1Q9BYJ9 559 aaKnown RBP15.25■□□□□ 0.03
SDCBP-201ENST00000260130 SLC6A15Q9H2J7 730 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 TPT1P8Q9HAU6 139 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 SMPD3Q9NY59 655 aaPredicted RBP15.25■□□□□ 0.03
SDCBP-201ENST00000260130 FBXL2Q9UKC9 423 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 SLC5A6Q9Y289 635 aa15.25■□□□□ 0.03
SDCBP-201ENST00000260130 A0A096LPI6 279 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 A0A1B0GUH1 482 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 TCRBV5S2A0A599 114 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 OR14I1A6ND48 311 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 C17orf51A8MQB3 221 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 HMGN4O00479 90 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 SCDO00767 359 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 PRRG2O14669 202 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 LRRTM2O43300 516 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 NDUFB5O43674 189 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 STX11O75558 287 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 LDLRP01130 860 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 CA7P43166 264 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 C3AR1Q16581 482 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 FLYWCH1Q4VC44 716 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 C4orf17Q53FE4 359 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 PAGE3Q5JUK9 113 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 PATL1Q86TB9 770 aaKnown RBP15.24■□□□□ 0.03
SDCBP-201ENST00000260130 IFNEQ86WN2 208 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 NEIL3Q8TAT5 605 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 ZGRF1Q86YA3 2104 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 B4DXG7 233 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 NPIPA2E9PIF3 369 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 NPIPA3F8WFD2 350 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 HTR1EP28566 365 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 DCTP40126 519 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 MAGEA8P43361 318 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 ATP12AP54707 1039 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 COX20Q5RI15 118 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 ZNF527Q8NB42 609 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 FAM83FQ8NEG4 500 aaPredicted RBP15.24■□□□□ 0.03
SDCBP-201ENST00000260130 OR4K17Q8NGC6 315 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 ZNF420Q8TAQ5 688 aaPredicted RBP15.24■□□□□ 0.03
SDCBP-201ENST00000260130 FAM57AQ8TBR7 257 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 RELTQ969Z4 430 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 AURKBQ96GD4 344 aaPredicted RBP15.24■□□□□ 0.03
SDCBP-201ENST00000260130 DSN1Q9H410 356 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 HHATLQ9HCP6 504 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 SLAMF8Q9P0V8 285 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 SH3BGRL2Q9UJC5 107 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 ERRFI1Q9UJM3 462 aaPredicted RBP15.24■□□□□ 0.03
SDCBP-201ENST00000260130 TINAGQ9UJW2 476 aa15.24■□□□□ 0.03
SDCBP-201ENST00000260130 A0A1W2PQD3 144 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 EI24O14681 340 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 FCMRO60667 390 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 AGFG2O95081 481 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 TPOP07202 933 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 ENDOUP21128 410 aaKnown RBP15.23■□□□□ 0.03
SDCBP-201ENST00000260130 MVDP53602 400 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 EIPR1Q53HC9 387 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 RABL3Q5HYI8 236 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 LRIF1Q5T3J3 769 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 YRDCQ86U90 279 aaKnown RBP15.23■□□□□ 0.03
SDCBP-201ENST00000260130 DOLPP1Q86YN1 238 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 FADS6Q8N9I5 356 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 OR2M3Q8NG83 312 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 SARAFQ96BY9 339 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 ZNF350Q9GZX5 532 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 PLGRKTQ9HBL7 147 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 MED11Q9P086 117 aa15.23■□□□□ 0.03
SDCBP-201ENST00000260130 NPIPA5A0A0B4J1W7 369 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 NPIPA7E9PJI5 369 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 NPIPB9F8W1W9 429 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 GUSBP08236 651 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 NPIPA8P0DM63 369 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 HOXB9P17482 250 aaPredicted RBP15.22■□□□□ 0.03
SDCBP-201ENST00000260130 SRD5A2P31213 254 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 GPR68Q15743 365 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 KLHL26Q53HC5 615 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 WIPI1Q5MNZ9 446 aaPredicted RBP15.22■□□□□ 0.03
SDCBP-201ENST00000260130 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.22■□□□□ 0.03
SDCBP-201ENST00000260130 FJX1Q86VR8 437 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 GATSQ8NAP1 163 aa15.22■□□□□ 0.03
SDCBP-201ENST00000260130 C12orf43Q96C57 262 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms