RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 NCKAP1Q9Y2A7 1128 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 DAPL1A0PJW8 107 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 SGK494L7N484 410 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 CYR61O00622 381 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 TNFRSF10CO14798 259 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 FAM157BP0CG42 384 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 FOXK2Q01167 660 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 PLAURQ03405 335 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 MGAT2Q10469 447 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 TRILQ7L0X0 811 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 CDK20Q8IZL9 346 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 SHISA5Q8N114 240 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 SLC37A3Q8NCC5 494 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 OR13C2Q8NGS9 318 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 PTP4A1Q93096 173 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 RERGQ96A58 199 aaPredicted RBP20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 TBX5Q99593 518 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 KCNJ15Q99712 375 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 RANGRFQ9HD47 186 aaPredicted RBP20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 TRIM36Q9NQ86 728 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 C14orf105Q9NVL8 296 aa20.04■□□□□ 0.8
SH2D3A-201ENST00000245908 SLC22A31A6NKX4 558 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 LINC01565O15544 149 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 BRINP1O60477 761 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 UBL4AP11441 157 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 CTBP2P56545 445 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 FIGNL1Q6PIW4 674 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 NR2C2APQ86WQ0 139 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 SLC38A6Q8IZM9 456 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 FAM109AQ8N4B1 249 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 NLGN4YQ8NFZ3 816 aaPredicted RBP20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 FAM3CQ92520 227 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 AHCYL2Q96HN2 611 aaKnown RBP20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 ART5Q96L15 291 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 FBXL21Q9UKT6 434 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 MED31Q9Y3C7 131 aa20.03■□□□□ 0.8
SH2D3A-201ENST00000245908 A0A0G2JMP0 313 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 PRR23D1E9PI22 279 aaPredicted RBP20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 LYRM1O43325 122 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 PRR23D2P0DMB1 279 aaPredicted RBP20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 CD53P19397 219 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 BMP8BP34820 402 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 POU6F2P78424 691 aaPredicted RBP20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 EXOSC7Q15024 291 aaKnown RBP20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 KLHL12Q53G59 568 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 ZNF613Q6PF04 617 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 LYPD8Q6UX82 237 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 BMP8AQ7Z5Y6 402 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 ABI3BPQ7Z7G0 1075 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 LIX1LQ8IVB5 337 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 UBL7Q96S82 380 aaPredicted RBP20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 IFT27Q9BW83 186 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 POLE3Q9NRF9 147 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 EVA1BQ9NVM1 165 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 CT62P0C5K7 136 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 HTR2BP41595 481 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 OR3A3P47888 321 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 LSSP48449 732 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 SHC2P98077 582 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 SF3A2Q15428 464 aaKnown RBP20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 HBMQ6B0K9 141 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 TRIM48Q8IWZ4 208 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 OR10H4Q8NGA5 316 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 OR5T3Q8NGG3 340 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 OR5W2Q8NH69 310 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 BAHD1Q8TBE0 780 aaPredicted RBP20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 UBASH3BQ8TF42 649 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 TEAD3Q99594 435 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 ZNF559Q9BR84 538 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 CD93Q9NPY3 652 aa20.02■□□□□ 0.8
SH2D3A-201ENST00000245908 GXYLT2A0PJZ3 443 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 EGFP01133 1207 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 ELK1P19419 428 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 HNRNPA2B1P22626 353 aaKnown RBP20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 F8A1P23610 371 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 SRP54P61011 504 aaKnown RBP20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 ADAM15Q13444 863 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 RNF44Q7L0R7 432 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 CTHRC1Q96CG8 243 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 FYTTD1Q96QD9 318 aaKnown RBP20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 EVA1AQ9H8M9 152 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 MEPEQ9NQ76 525 aaPredicted RBP20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 SLC35A3Q9Y2D2 325 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 LRP4O75096 1905 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 PTP4A3O75365 173 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 REM1O75628 298 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 MT-ND5P03915 603 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 COL4A2P08572 1712 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 SAGP10523 405 aaPredicted RBP20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 PSKH1P11801 424 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 PVRP15151 417 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 GABRA3P34903 492 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 TATDN3Q17R31 274 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 ALG11Q2TAA5 492 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 C9orf50Q5SZB4 431 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 IDNKQ5T6J7 187 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 TMEM184AQ6ZMB5 413 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 GPALPP1Q8IXQ4 340 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 CA13Q8N1Q1 262 aa20.01■□□□□ 0.79
SH2D3A-201ENST00000245908 ZNF655Q8N720 491 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms