RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 IRF2BPLQ9H1B7 796 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 PPIL3Q9H2H8 161 aaKnown RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 TRIM36Q9NQ86 728 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 CMC2Q9NRP2 79 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 DUSP22Q9NRW4 184 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 ACTR10Q9NZ32 417 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 EXTL2Q9UBQ6 330 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 PCOLCE2Q9UKZ9 415 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 SATB2Q9UPW6 733 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 TRAV27A0A087WT01 109 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 OR6C74A6NCV1 312 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 PRR23D1E9PI22 279 aaPredicted RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 E9PI62 339 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 TPD52L2O43399 206 aaKnown RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 RCBTB2O95199 551 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 ATP1B1P05026 303 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 PRR23D2P0DMB1 279 aaPredicted RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 SAGP10523 405 aaPredicted RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 ZNF10P21506 573 aaPredicted RBP13.32□□□□□ -0.28
HIF3A-202ENST00000244303 ALAS2P22557 587 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 SHC1P29353 583 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 INPP1P49441 399 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 GALK2Q01415 458 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 PLAURQ03405 335 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 GPR18Q14330 331 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 GALEQ14376 348 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 FAM27D1Q5T7N8 215 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 GARNL3Q5VVW2 1013 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 ARL9Q6T311 187 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 IL20RBQ6UXL0 311 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 TRILQ7L0X0 811 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 CADM2Q8N3J6 435 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 CDRT4Q8N9R6 151 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 OR5W2Q8NH69 310 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 MRGPRX1Q96LB2 322 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 BMFQ96LC9 184 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 OR51V1Q9H2C8 321 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 SIGLEC7Q9Y286 467 aa13.32□□□□□ -0.28
HIF3A-202ENST00000244303 LRP4O75096 1905 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 A0A0G2JMP0 313 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 A0A0X1KG70 313 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 GXYLT2A0PJZ3 443 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 A6NCN8 305 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 FAM86C2PA6NEL3 165 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 H0YGG7 62 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 CPNE3O75131 537 aaKnown RBP13.31□□□□□ -0.28
HIF3A-202ENST00000244303 CT62P0C5K7 136 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 CLUP10909 449 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 PVRP15151 417 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 NOS3P29474 1203 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 ACSL1P33121 698 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 BMP8BP34820 402 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 ARF3P61204 181 aaPredicted RBP13.31□□□□□ -0.28
HIF3A-202ENST00000244303 SHC2P98077 582 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 SF3A2Q15428 464 aaKnown RBP13.31□□□□□ -0.28
HIF3A-202ENST00000244303 PRICKLE4Q2TBC4 344 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 AMZ1Q400G9 498 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 ZNF57Q68EA5 555 aaPredicted RBP13.31□□□□□ -0.28
HIF3A-202ENST00000244303 HBMQ6B0K9 141 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 KIAA1324Q6UXG2 1013 aaKnown RBP13.31□□□□□ -0.28
HIF3A-202ENST00000244303 TMPRSS11FQ6ZWK6 438 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 BMP8AQ7Z5Y6 402 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 CDK20Q8IZL9 346 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 OR4M2Q8NGB6 313 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 GRHL3Q8TE85 626 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 ACOT12Q8WYK0 555 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 FAM3CQ92520 227 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 TEAD3Q99594 435 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 ZFYVE21Q9BQ24 234 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 WACQ9BTA9 647 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 LYRM4Q9HD34 91 aa13.31□□□□□ -0.28
HIF3A-202ENST00000244303 MEPEQ9NQ76 525 aaPredicted RBP13.31□□□□□ -0.28
HIF3A-202ENST00000244303 A0A087WV62 115 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 SLC22A31A6NKX4 558 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 SGK494L7N484 410 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 ARHGEF9O43307 516 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 PLOD3O60568 738 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 RFPL3O75679 317 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 IL9P15248 144 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 RFX3P48380 749 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 CLDN20P56880 219 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 YIF1BQ5BJH7 314 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 RPL13AP3Q6NVV1 102 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 ZAR1Q86SH2 424 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 OR51A7Q8NH64 312 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 SMAP2Q8WU79 429 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-202ENST00000244303 RERGQ96A58 199 aaPredicted RBP13.3□□□□□ -0.28
HIF3A-202ENST00000244303 STACQ99469 402 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 CAPN10Q9HC96 672 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 PRDM9Q9NQV7 894 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 EVA1BQ9NVM1 165 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 MAT2BQ9NZL9 334 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 MED31Q9Y3C7 131 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 PIAS3Q9Y6X2 628 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 BRINP1O60477 761 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 GABRA3P34903 492 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 LSSP48449 732 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 E2F1Q01094 437 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 Q5BKY6 102 aa13.3□□□□□ -0.28
HIF3A-202ENST00000244303 YIPF7Q8N8F6 280 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms