RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Gstm2P15626 218 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fpr1P33766 364 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Clec3bP43025 202 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cd38P56528 304 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Acta2P62737 377 aaKnown RBP11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Actg2P63268 376 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Foxk2Q3UCQ1 651 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Drd1Q61616 446 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ubr7Q8BU04 425 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Zfpm2Q8CCH7 1151 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Csnka2ipQ8CH19 720 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Agfg1Q8K2K6 561 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cdca4Q9CWM2 237 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Prps1Q9D7G0 318 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Kcnk7Q9Z2T1 307 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm13420A0A140LJJ2 248 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Dscr3O35075 297 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Acp2P24638 423 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 B230104I21RikQ3USW4 141 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Eid2Q6X7S9 236 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ffar4Q7TMA4 361 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Megf11Q80T91 1091 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc31a1Q8K211 196 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Rab38Q8QZZ8 211 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Rbms2Q8VC70 383 aaKnown RBP11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Dcun1d5Q9CXV9 237 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Serpinb7Q9D695 380 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Il23aQ9EQ14 196 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Adam25Q9R159 760 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ramp2Q9WUP0 189 aa11.12□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm17728E9Q5K2 132 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Emp3O35912 163 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Dnajb5O89114 348 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Kcnab1P63143 401 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 ShhQ62226 437 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fbxo42Q6PDJ6 717 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fpr-rs7Q71MR7 338 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfml2aQ8BHP7 681 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Znf436Q8BPP0 452 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 P2ry10bQ8BY68 352 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Sertm1Q8CD78 107 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr881Q8VF63 314 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ppp1r35Q9D8C8 260 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Lamb2Q61292 1799 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tex264E9Q137 309 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gabrg2P22723 474 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 TfptQ3U1J1 259 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Apex2Q68G58 516 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Flrt2Q8BLU0 660 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 StgQ8BM15 349 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Neto1Q8R4I7 533 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr165Q8VFA2 313 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr812Q8VG64 310 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ilf3Q9Z1X4 898 aaKnown RBP11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Zfp442A2AQA0 667 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr723E9PZU2 309 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Zfp871G5E905 615 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr724K7N5X7 309 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Sirt6P59941 334 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Isg20l2Q3U1G5 368 aaKnown RBP11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ahsa1Q8BK64 338 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1390Q8VGW9 311 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Fastkd2Q922E6 689 aaKnown RBP11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr727A2RTN7 324 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 SvaE9PX96 165 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm3099J3QPA5 205 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 HbaP01942 142 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ctbp2P56546 445 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 CblbQ3TTA7 982 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr146Q60884 306 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1463Q7TQR3 310 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cnppd1Q8K158 407 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr583Q8VG25 319 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr649Q8VGW1 312 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Spef1Q99JL1 234 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tcf19Q99KJ5 263 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Entpd4Q9DBT4 613 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Vmn1r53Q9EP93 310 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mpeg1A1L314 713 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 H2-D1P14427 368 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Dcaf7P61963 342 aaKnown RBP11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc9a3r1P70441 355 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cldn34b4Q3V0X2 211 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Rab9bQ8BHH2 201 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tbl1xr1Q8BHJ5 514 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ncr1Q8C567 325 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Emc1Q8C7X2 997 aaKnown RBP11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Q8K207 121 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr769Q8K501 312 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mterf3Q8R3J4 412 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Egln2Q91YE2 419 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 AmnQ99JB7 458 aaKnown RBP11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Q9D5Y0 588 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 C1qtnf3Q9ES30 246 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hapln2Q9ESM3 341 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slc6a14Q9JMA9 638 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gon4lQ9DB00 2260 aa11.11□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Iglc4A0A0G2JEK5 104 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hsd3b1P24815 373 aa11.1□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Nr2f6P43136 390 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms