RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 YIF1BQ5BJH7 314 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 PRPF38BQ5VTL8 546 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 NRROSQ86YC3 692 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 FAM181AQ8N9Y4 354 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 TMEM52Q8NDY8 209 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 OR52L1Q8NGH7 329 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 OR5J2Q8NH18 312 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 CD180Q99467 661 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 SLC17A9Q9BYT1 436 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 SRMSQ9H3Y6 488 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 BABAM2Q9NXR7 383 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 CDH10Q9Y6N8 788 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 UNC119BA6NIH7 251 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 FABP7O15540 132 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 CPMP14384 443 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 MLC1Q15049 377 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 OR1Q1Q15612 314 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 DEFB110Q30KQ9 67 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 DNAJA4Q8WW22 397 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 PEX11GQ96HA9 241 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 SDF2Q99470 211 aa13.03□□□□□ -0.32
CACNA1A-228ENST00000636610 ANKRD61A6NGH8 418 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 GABRA3P34903 492 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 TALDO1P37837 337 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF136P52737 540 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 ADAM15Q13444 863 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 ZSWIM7Q19AV6 140 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 NDUFAF6Q330K2 333 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 SLC25A30Q5SVS4 291 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 OTPQ5XKR4 325 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 MZT2AQ6P582 158 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 COX18Q8N8Q8 333 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 TTLQ8NG68 377 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 OR4K13Q8NH42 304 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 HDAC8Q9BY41 377 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 C11orf49Q9H6J7 331 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 IL21RQ9HBE5 538 aa13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 ZNF346Q9UL40 294 aaKnown RBP13.02□□□□□ -0.32
CACNA1A-228ENST00000636610 A0A0A6YYJ9 748 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 SLC9B1P1A6NJY1 282 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 ARHGEF9O43307 516 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 RASGRP1O95267 797 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 IL9P15248 144 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 PSMB10P40306 273 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 STAT5AP42229 794 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 MLLT3P42568 568 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 PPM1FP49593 454 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 ERVK-21P61565 698 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 RUNX3Q13761 415 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 CD200R1LQ6Q8B3 271 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 TMEM64Q6YI46 380 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 LINC00471Q8N535 108 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 SDR9C7Q8NEX9 313 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 OR4K14Q8NGD5 310 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 OR8H1Q8NGG4 311 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 TMEM239Q8WW34 195 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 TIMP4Q99727 224 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 TMEM168Q9H0V1 697 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 ING3Q9NXR8 418 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 COQ3Q9NZJ6 369 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 THAP10Q9P2Z0 257 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 SLC23A1Q9UHI7 598 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 A0A087WV48 116 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 PRR23D1E9PI22 279 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 CHST10O43529 356 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 ORC5O43913 435 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 EFCAB14O75071 495 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 ZNF780AO75290 641 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 RGS9O75916 674 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 CTSBP07858 339 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 PRR23D2P0DMB1 279 aaPredicted RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 PTHLHP12272 177 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 SSTR2P30874 369 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 TRA2BP62995 288 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 SHC2P98077 582 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 DECR1Q16698 335 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 RNLSQ5VYX0 342 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 FBXO42Q6P3S6 717 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 NIPAL3Q6P499 406 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 SERPINA12Q8IW75 414 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 OR4N2Q8NGD1 307 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 TRMT10AQ8TBZ6 339 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 BPIFA2Q96DR5 249 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 MS4A3Q96HJ5 214 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 PRSS27Q9BQR3 290 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 MED18Q9BUE0 208 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 CLDND1Q9NY35 253 aa13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 AK6Q9Y3D8 172 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-228ENST00000636610 ASCC3Q8N3C0 2202 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 TDRD6O60522 2096 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 CDHR4A6H8M9 788 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 C4orf47A7E2U8 309 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 HNRNPA1P09651 372 aaKnown RBP eCLIP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 GDI1P31150 447 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 GZMKP49863 264 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 RRAS2P62070 204 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 IL17RCQ8NAC3 791 aa13.01□□□□□ -0.33
CACNA1A-228ENST00000636610 TEAD3Q99594 435 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms